Motif IL_07880.1 Version IL_07880.1 of this group appears in releases 3.88 to 3.95
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 10 | 11 | 1-3 | 1-11 | 3-10 | 4-9 | 5-8 | 6-7 | 9-11 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_2R8S_003 | 2R8S | 0.0000 | 2 | Kink-turn related | R | P4-P6 RNA RIBOZYME DOMAIN | C | 121 | A | 122 | A | 123 | C | 124 | G | 126 | C | 127 | * | G | 195 | A | 196 | C | 197 | A | 198 | G | 200 | ncSs | cWW | tWH | tHW | cWW | cWW | cSs |
| 2 | IL_1GID_011 | 1GID | 0.1905 | 2 | B | P4-P6 RNA RIBOZYME DOMAIN | C | 121 | A | 122 | A | 123 | C | 124 | G | 126 | C | 127 | * | G | 195 | A | 196 | C | 197 | A | 198 | G | 200 | cWW | tWH | tHW | cWW | cWW | cSs |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAACAGC*GACAUG | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AACAG*ACAU | 2 |
Release history
| Release | 3.88 | 3.89 | 3.90 | 3.91 | 3.92 | 3.93 | 3.94 | 3.95 |
|---|---|---|---|---|---|---|---|---|
| Date | 2024-09-11 | 2024-10-09 | 2024-11-06 | 2024-12-04 | 2025-01-01 | 2025-01-29 | 2025-02-26 | 2025-03-26 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Kink-turn related (1)
- Basepair signature
- cWW-cSS-L-tWH-tHW-cWW-cWW
- Heat map statistics
- Min 0.19 | Avg 0.10 | Max 0.19
Coloring options: