Motif IL_08981.1 Version IL_08981.1 of this group appears in releases 0.1 to 0.1
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 8 | 1-8 | 2-7 | 4-5 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3F1H_044 | 3F1H | 0.0000 | 1 | A | 23S RRNA | C | 1202 | G | 1203 | A | 1204 | G | 1206 | * | U | 1240 | A | 1241 | A | 1242 | G | 1243 | cWW | tSH | cWW |
| 2 | IL_3BNQ_011 | 3BNQ | 0.8357 | 1 | C+D | A site of human mitochondrial ribosome, A chain + A site of human mitochondrial ribosome, B chain | G | 15 | C | 16 | A | 17 | G | 19 | * | C | 5 | A | 6 | C | 7 | C | 8 | cWW | cWW | |
| 3 | IL_3BNQ_005 | 3BNQ | 0.8477 | 1 | A+B | A site of human mitochondrial ribosome, A chain | G | 15 | C | 16 | A | 17 | G | 19 | * | C | 7 | A | 8 | C | 9 | C | 10 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GCAAG*CACC | 2 |
| CGAUG*UAAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CAA*AC | 2 |
| GAU*AA | 1 |
Release history
| Release | 0.1 |
|---|---|
| Date | 2011-12-08 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
| Child motif | Common motif instances | Only in IL_08981.1 | Only in the child motif |
|---|---|---|---|
| IL_01643.1 Compare | IL_3BNQ_011, IL_3F1H_044, IL_3BNQ_005 | IL_2ZJR_057, IL_3BNP_003, IL_3BNP_002, IL_1SAQ_002, IL_2ZJR_082, IL_3D0U_002, IL_1FJG_059, IL_1SA9_002, IL_1SA9_001, IL_1S72_098 |
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