#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4 5 6 7break 8 9 10 111-114-94-105-67-8
1 IL_1S72_0411S720.00002Kink-turn related (H)0 LSU rRNAU1115U1116A1117A1118G1119U1120G1121*C1243U1244A1246A1248cWWntHWntWWcSHcWW
2 IL_2ZJR_0352ZJR0.12242X LSU rRNAC1029U1030C1031A1032G1033U1034G1035*C1150U1151A1153G1155cWWntHWcSHcWW
3 IL_3F1H_0383F1H0.23772A23S RRNAC1018U1019A1020A1021G1022U1023G1024*C1140U1141A114|||BG1144cWWntHWcSHcWW

3D structures

Complete motif including flanking bases
SequenceCounts
UUAAGUG*CUCAAA1
CUCAGUG*CUCAAG1
CUAAGUG*CUUAAG1
Non-Watson-Crick part of the motif
SequenceCounts
UAAGU*UCAA1
UCAGU*UCAA1
UAAGU*UUAA1

Release history

Release0.10.20.30.4
Date2011-12-082011-12-082011-12-082011-12-08
StatusNew id, no parentsExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

Child motifCommon motif instancesOnly in IL_10326.1Only in the child motif
IL_10326.2
Compare
IL_2ZJR_035, IL_1S72_041IL_3F1H_038IL_3PYO_038
Annotations
  • (2)
  • Kink-turn related (H) (1)
  • Basepair signature
    Heat map statistics
    Min 0.12 | Avg 0.13 | Max 0.24
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