IL_11266.1

#S	Loop id	PDB	Disc	#Non-core	Annotation	Chain(s)		1		2		3	break		4		5	1-2	1-5	2-5	3-4
1	IL_1S72_075	1S72	0.6145	1	Minor groove platform (H)	0	U	2473	C	2475	C	2476	*	G	2111	A	2112	cSH	cWW		cWW
2	IL_3O30_006	3O30	0.6756	0		1	C	50	A	51	U	52	*	A	428	G	429		cWW	ntHS	cWW
3	IL_3PYO_073	3PYO	0.4614	1		A	U	2438	C	2440	C	2441	*	G	2070	A	2071	cSH	cWW		cWW
4	IL_1S72_035	1S72	0.3909	0	Minor groove platform (H)	0	U	1009	C	1010	C	1011	*	G	956	A	957	cSH	cWW		cWW
5	IL_3PYO_027	3PYO	0.3360	0		A	U	913	C	914	C	915	*	G	862	A	863	cSH	cWW		cWW
6	IL_2ZJR_077	2ZJR	0.4531	1	Minor groove platform (H)	X	U	2417	C	2419	C	2420	*	G	2053	A	2054	cSH	cWW		cWW
7	IL_2AW7_050	2AW7	0.6195	2		A	U	1199	U	1202	C	1203	*	G	1057	G	1058		cWW	tHS	cWW
8	IL_3O58_113	3O58	0.4132	1		1	U	2807	C	2809	C	2810	*	G	2412	A	2413	cSH	cWW		cWW
9	IL_2QBG_081	2QBG	0.4479	1		B	U	2438	C	2440	U	2441	*	A	2070	A	2071	cSH	cWW		cWW
10	IL_3O58_053	3O58	0.3210	0		1	U	1050	U	1051	U	1052	*	A	997	A	998	ncSH	cWW	ntHS	cWW
11	IL_2QBG_008	2QBG	0.3441	0		B	U	434	C	435	C	436	*	G	43	A	44	cSH	cWW		cWW
12	IL_1FJG_038	1FJG	0.2699	0	Minor groove platform (H)	A	C	1226	A	1227	C	1228	*	G	953	G	954		cWW	ntHS	cWW
13	IL_2XZM_061	2XZM	0.2940	0		A	C	1430	A	1431	C	1432	*	G	1150	G	1151		cWW	ntHS	cWW
14	IL_1S72_033	1S72	0.2316	0	Single bulged A (H)	0	U	942	A	943	G	944	*	C	1023	G	1024	ncSH	cWW		cWW
15	IL_2AW7_067	2AW7	0.1945	0		A	U	1440	A	1441	G	1442	*	C	1460	G	1461		cWW	tHS	cWW
16	IL_1U6B_007	1U6B	0.0000	0	Minor groove platform	B	G	128	A	129	G	130	*	C	177	C	178	cSH	cWW	tHS	cWW
17	IL_1Y0Q_003	1Y0Q	0.2296	0	Minor groove platform	A	A	120	C	121	G	122	*	C	192	U	193		cWW	ntHS	cWW
18	IL_2AW7_045	2AW7	0.2722	0		A	C	1226	A	1227	C	1228	*	G	953	G	954		cWW	ntHS	cWW
19	IL_2QWY_006	2QWY	0.2924	0		B	U	40	A	41	G	42	*	C	23	A	24		cWW		cWW
20	IL_3PYO_003	3PYO	0.4061	0		A	U	434	C	435	C	436	*	G	43	A	44	cSH	cWW		cWW
21	IL_2XZM_026	2XZM	0.2927	0		A	U	493	A	494	C	495	*	G	477	G	478		ncWW	ntHS	cWW
22	IL_2ZJR_027	2ZJR	0.2629	0	Minor groove platform (H)	X	U	925	C	926	C	927	*	G	875	A	876	ncSH	cWW		cWW
23	IL_2QWY_009	2QWY	0.2796	0	Minor groove platform	C	U	40	A	41	G	42	*	C	23	A	24		cWW	tHS	cWW
24	IL_2ZJR_003	2ZJR	0.2543	0	Minor groove platform (H)	X	U	447	C	448	C	449	*	G	42	A	43	ncSH	cWW		cWW
25	IL_2QWY_003	2QWY	0.3223	0		A	U	40	A	41	G	42	*	C	23	A	24		cWW	tHS	cWW

3D structures

Complete motif including flanking bases

Sequence	Counts
UCC*GA	6
UACC*GA	4
CAC*GG	3
UAG*CA	3
UAG*CG	2
CAU*AG	1
UCAUC*GG	1
UACU*AA	1
UUU*AA	1
GAG*CC	1
ACG*CU	1
UAC*GG	1

Non-Watson-Crick part of the motif

Sequence	Counts
A*	11
C*	7
AC*	5
CAU*	1
U*	1

Release history

Release	0.5
Date	2011-12-08
Status	New id, 2 parents

Parent motifs

Parent motif	Common motif instances	Only in IL_11266.1	Only in the parent motif
IL_83385.2 Compare	IL_1FJG_038, IL_1S72_033, IL_1S72_035, IL_2QWY_009, IL_2QWY_006, IL_1S72_075, IL_2QWY_003, IL_2ZJR_077	IL_1U6B_007, IL_3PYO_073, IL_2ZJR_027, IL_2QBG_081, IL_1Y0Q_003, IL_3O30_006, IL_2ZJR_003, IL_2AW7_045, IL_3O58_053, IL_2AW7_050, IL_2AW7_067, IL_3PYO_003, IL_3O58_113, IL_2QBG_008, IL_3PYO_027, IL_2XZM_061, IL_2XZM_026	IL_3F1H_031, IL_3F1H_027, IL_1FJG_004, IL_3F1H_070, IL_3G78_005, IL_1FJG_052, IL_1FJG_042, IL_2GDI_007, IL_3F1H_078, IL_2GDI_003
IL_87014.1 Compare	IL_2ZJR_003, IL_2ZJR_027	IL_2QWY_009, IL_1U6B_007, IL_3O30_006, IL_2AW7_050, IL_2QBG_008, IL_2QWY_006, IL_2QWY_003, IL_1Y0Q_003, IL_2QBG_081, IL_1FJG_038, IL_3PYO_073, IL_2AW7_045, IL_3O58_053, IL_2AW7_067, IL_3O58_113, IL_1S72_075, IL_2XZM_061, IL_1S72_033, IL_2XZM_026, IL_1S72_035, IL_3PYO_003, IL_3PYO_027, IL_2ZJR_077	IL_1FJG_039, IL_3F1H_068, IL_3F1H_056, IL_2ZJR_067, IL_1FJG_051, IL_1S72_066

Children motifs

Child motif	Common motif instances	Only in IL_11266.1	Only in the child motif
IL_44540.1 Compare	IL_1U6B_007, IL_1FJG_038, IL_1S72_033, IL_2QBG_008, IL_2QBG_081, IL_1Y0Q_003, IL_2ZJR_003, IL_2AW7_045, IL_2AW7_050, IL_2AW7_067, IL_2ZJR_077, IL_2QWY_009, IL_1S72_035, IL_2QWY_006, IL_1S72_075, IL_2QWY_003, IL_2XZM_061, IL_2ZJR_027	IL_3PYO_073, IL_2XZM_026, IL_3O30_006, IL_3O58_053, IL_3PYO_003, IL_3O58_113, IL_3PYO_027	IL_3UXR_028, IL_3UXR_003, IL_1FJG_004, IL_2AW7_004, IL_1FJG_042, IL_2GDI_007, IL_2XZM_070, IL_2AW7_035, IL_3RW6_005, IL_2GDI_003, IL_3U5F_029, IL_3U5F_062, IL_3U5F_005, IL_3IWN_001, IL_1X8W_004, IL_3U5H_041, IL_4A1B_020, IL_4A1B_049, IL_4A1B_128, IL_1FJG_052, IL_1FJG_051, IL_3UXR_078, IL_3RW6_001, IL_2XZM_005, IL_3U5F_071, IL_3UXR_070, IL_4A1B_096, IL_3U5H_099
IL_30650.1 Compare	IL_2XZM_026	IL_2QWY_009, IL_1FJG_038, IL_3O30_006, IL_2AW7_050, IL_2QBG_008, IL_2QWY_006, IL_2QWY_003, IL_1Y0Q_003, IL_2QBG_081, IL_1U6B_007, IL_3PYO_073, IL_2ZJR_027, IL_2ZJR_003, IL_2AW7_045, IL_3O58_053, IL_2AW7_067, IL_3O58_113, IL_1S72_075, IL_2XZM_061, IL_1S72_033, IL_1S72_035, IL_3PYO_003, IL_3PYO_027, IL_2ZJR_077

Motif IL_11266.1 Version IL_11266.1 of this group appears in releases 0.5 to 0.5 Download Csv Json

3D structures

Complete motif including flanking bases

Non-Watson-Crick part of the motif

Release history

Parent motifs

Children motifs

Motif IL_11266.1 Version IL_11266.1 of this group appears in releases 0.5 to 0.5

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Csv

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