Motif IL_11751.1 Version IL_11751.1 of this group appears in releases 0.9 to 1.15

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Pairwise interactions
Sequence variants
History

#S	Loop id	PDB	Disc	#Non-core	Annotation	Chain(s)	Standardized name		1		2		3		4		5	break		6		7	1-7	5-6
1	IL_1FJG_032	1FJG	0.0000	0	Left turn (H)	A	SSU rRNA	G	774	G	775	G	776	A	777	G	778	*	U	804	C	805	cWW	cWW
2	IL_2AW7_039	2AW7	0.0828	0		A	16S ribosomal RNA	G	774	G	775	G	776	A	777	G	778	*	U	804	C	805	cWW	cWW

3D structures

Complete motif including flanking bases

Sequence	Counts
GGGAG*UC	2

Non-Watson-Crick part of the motif

Sequence	Counts
GGA*	2

Release history

Release	0.9	0.10	0.11	0.12	1.0	1.1	1.2	1.3	1.4	1.5	1.6	1.7	1.8	1.9	1.10	1.11	1.12	1.13	1.14	1.15
Date	2013-02-17	2013-02-17	2013-02-17	2013-02-17	2013-03-04	2013-04-08	2013-05-04	2013-06-01	2013-07-01	2013-08-03	2013-08-31	2013-09-28	2013-11-05	2013-12-07	2014-01-04	2014-02-01	2014-03-01	2014-03-29	2014-04-27	2014-06-20
Status	New id, 2 parents	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match

Parent motifs

Parent motif	Common motif instances	Only in IL_11751.1	Only in the parent motif
IL_52752.1 Compare	IL_1FJG_032	IL_2AW7_039
IL_87173.1 Compare	IL_2AW7_039	IL_1FJG_032	IL_1U6B_009

Children motifs

Child motif	Common motif instances	Only in IL_11751.1	Only in the child motif
IL_25808.1 Compare	IL_1FJG_032	IL_2AW7_039
IL_85010.1 Compare	IL_2AW7_039	IL_1FJG_032	IL_4LCK_003, IL_4FNJ_003, IL_3J7A_046, IL_1U6B_009

Annotations: Left turn (H) (1)
(1)
Basepair signature: cWW-L-L-L-cWW
Heat map statistics: Min 0.08 | Avg 0.04 | Max 0.08

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Coloring options: Nucleotide numbers

Motif IL_11751.1 Version IL_11751.1 of this group appears in releases 0.9 to 1.15 Download Csv Json

3D structures

Complete motif including flanking bases

Non-Watson-Crick part of the motif

Release history

Parent motifs

Children motifs

Motif IL_11751.1 Version IL_11751.1 of this group appears in releases 0.9 to 1.15

Download

Csv

Json