Motif IL_11751.1 Version IL_11751.1 of this group appears in releases 0.9 to 1.15
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 1-7 | 5-6 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_1FJG_032 | 1FJG | 0.0000 | 0 | A | SSU rRNA | G | 774 | G | 775 | G | 776 | A | 777 | G | 778 | * | U | 804 | C | 805 | cWW | cWW | |
| 2 | IL_2AW7_039 | 2AW7 | 0.0828 | 0 | A | 16S ribosomal RNA | G | 774 | G | 775 | G | 776 | A | 777 | G | 778 | * | U | 804 | C | 805 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GGGAG*UC | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GGA* | 2 |
Release history
| Release | 0.9 | 0.10 | 0.11 | 0.12 | 1.0 | 1.1 | 1.2 | 1.3 | 1.4 | 1.5 | 1.6 | 1.7 | 1.8 | 1.9 | 1.10 | 1.11 | 1.12 | 1.13 | 1.14 | 1.15 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-03-04 | 2013-04-08 | 2013-05-04 | 2013-06-01 | 2013-07-01 | 2013-08-03 | 2013-08-31 | 2013-09-28 | 2013-11-05 | 2013-12-07 | 2014-01-04 | 2014-02-01 | 2014-03-01 | 2014-03-29 | 2014-04-27 | 2014-06-20 |
| Status | New id, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
| Parent motif | Common motif instances | Only in IL_11751.1 | Only in the parent motif |
|---|---|---|---|
| IL_52752.1 Compare | IL_1FJG_032 | IL_2AW7_039 | |
| IL_87173.1 Compare | IL_2AW7_039 | IL_1FJG_032 | IL_1U6B_009 |
Children motifs
| Child motif | Common motif instances | Only in IL_11751.1 | Only in the child motif |
|---|---|---|---|
| IL_25808.1 Compare | IL_1FJG_032 | IL_2AW7_039 | |
| IL_85010.1 Compare | IL_2AW7_039 | IL_1FJG_032 | IL_4LCK_003, IL_4FNJ_003, IL_3J7A_046, IL_1U6B_009 |
- Annotations
- Basepair signature
- cWW-L-L-L-cWW
- Heat map statistics
- Min 0.08 | Avg 0.04 | Max 0.08
Coloring options: