Motif IL_14135.1 Version IL_14135.1 of this group appears in releases 3.88 to 3.88
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | break | 9 | 10 | 11 | 12 | 13 | 14 | 1-14 | 2-13 | 3-12 | 4-5 | 5-11 | 6-10 | 8-9 | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_8C3A_446 | 8C3A | 0.0000 | 0 | 8x6 Sarcin-Ricin with inserted Y; G-bulge (H) | CM | SSU rRNA | G | 1096 | G | 1097 | A | 1098 | G | 1099 | U | 1100 | A | 1101 | U | 1102 | G | 1103 | * | U | 1114 | G | 1115 | A | 1116 | A | 1117 | A | 1118 | C | 1119 | cWW | tSH | tHH | cSH | tWH | tHS | cWW |
| 2 | IL_4V88_440 | 4V88 | 0.0828 | 0 | 8x6 Sarcin-Ricin with inserted Y; G-bulge | A6 | SSU rRNA | G | 1111 | G | 1112 | A | 1113 | G | 1114 | U | 1115 | A | 1116 | U | 1117 | G | 1118 | * | U | 1129 | G | 1130 | A | 1131 | A | 1132 | A | 1133 | C | 1134 | cWW | tSH | tHH | cSH | tWH | tHS | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GGAGUAUG*UGAAAC | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GAGUAU*GAAA | 2 |
Release history
| Release | 3.88 |
|---|---|
| Date | 2024-09-11 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- 8x6 Sarcin-Ricin with inserted Y; G-bulge (1)
- 8x6 Sarcin-Ricin with inserted Y; G-bulge (H) (1)
- Basepair signature
- cWW-tSH-tHH-cSH-tWH-tHS-cWW-L
- Heat map statistics
- Min 0.08 | Avg 0.04 | Max 0.08
Coloring options: