#SLoop idPDBDisc#Non-coreAnnotationChain(s) 1 2break 3 4 51-52-3
1 IL_4FNJ_0044FNJ0.14220AA11G12*U25A26U27cWWcWW
2 IL_1U6B_0101U6B0.00000Major groove intercalationBA150G151*U160A161U162cWWcWW
3 IL_1NTB_0011NTB0.71160B+AG114G115*C5G6C7cWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
AG*UAU2
GG*CGC1
Non-Watson-Crick part of the motif
SequenceCounts
*A2
*G1

Release history

Release0.90.100.110.121.0
Date2013-02-172013-02-172013-02-172013-02-172013-03-04
StatusUpdated, 1 parentExact matchExact matchExact matchExact match

Parent motifs

Parent motifCommon motif instancesOnly in IL_16166.2Only in the parent motif
IL_16166.1
Compare
IL_1U6B_010, IL_1NTB_001IL_4FNJ_004

Children motifs

Child motifCommon motif instancesOnly in IL_16166.2Only in the child motif
IL_16166.3
Compare
IL_1U6B_010, IL_1NTB_001, IL_4FNJ_004IL_4A1B_069
Annotations
  • (2)
  • Major groove intercalation (1)
  • Basepair signature
    cWW-R-cWW
    Heat map statistics
    Min 0.14 | Avg 0.36 | Max 0.77
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