Motif IL_25412.1 Version IL_25412.1 of this group appears in releases 3.89 to 3.97
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 1-7 | 5-6 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_1NTA_002 | 1NTA | 0.0000 | 2 | Major groove intercalation | A+B | RNA (22-mer) + RNA (18-mer) | C | 7 | A | 8 | U | 11 | G | 12 | G | 13 | * | C | 113 | G | 114 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAUUUGG*CG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AUUUG* | 1 |
Release history
| Release | 3.89 | 3.90 | 3.91 | 3.92 | 3.93 | 3.94 | 3.95 | 3.96 | 3.97 |
|---|---|---|---|---|---|---|---|---|---|
| Date | 2024-10-09 | 2024-11-06 | 2024-12-04 | 2025-01-01 | 2025-01-29 | 2025-02-26 | 2025-03-26 | 2025-04-23 | 2025-05-21 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Major groove intercalation (1)
- Basepair signature
- cWW-L-cWW-L-L
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: