Motif IL_26785.1 Version IL_26785.1 of this group appears in releases 3.26 to 3.90

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Pairwise interactions
Sequence variants
History

#S	Loop id	PDB	Disc	#Non-core	Annotation	Chain(s)	Standardized name		1		2		3		4		5		6		7		8		9		10	break		11		12		13		14		15		16		17		18	1-18	2-17	3-16	4-5	5-15	6-14	9-12	10-11
1	IL_6UFH_002	6UFH	0.0945	0	10x8 Sarcin-Ricin; G-bulge	A	RNA (167-MER)	C	54	C	55	A	56	G	57	U	58	A	59	G	60	A	61	A	62	C	63	*	G	34	A	35	A	36	G	37	A	38	A	39	C	40	G	41	cWW	ntSH	ntHH	ncSH	tWH	tHS	ncWw	cWW
2	IL_6UFG_002	6UFG	0.0000	0	10x8 Sarcin-Ricin; G-bulge	A	RNA (166-MER)	C	53	C	54	A	55	G	56	U	57	A	58	G	59	A	60	A	61	C	62	*	G	34	A	35	A	36	G	37	A	38	A	39	C	40	G	41	cWW	ntSH	tHH	cSH	tWH	tHS	cWw	cWW
3	IL_6UFM_002	6UFM	0.1031	0	10x8 Sarcin-Ricin; G-bulge	B	RNA (98-MER)	U	64	C	65	A	66	G	67	U	68	A	69	G	70	A	71	A	72	C	73	*	G	34	A	35	A	36	G	37	A	38	A	39	C	40	G	41	cWW	tSH	tHH	cSH	tWH	tHS	cWw	cWW

3D structures

Complete motif including flanking bases

Sequence	Counts
CCAGUAGAAC*GAAGAACG	2
UCAGUAGAAC*GAAGAACG	1

Non-Watson-Crick part of the motif

Sequence	Counts
CAGUAGAA*AAGAAC	3

Release history

Release	3.26	3.27	3.28	3.29	3.30	3.31	3.32	3.33	3.34	3.35	3.36	3.37	3.38	3.39	3.40	3.41	3.42	3.43	3.44	3.45	3.46	3.47	3.48	3.49	3.50	3.51	3.52	3.53	3.54	3.55	3.56	3.57	3.58	3.59	3.60	3.61	3.62	3.63	3.64	3.65	3.66	3.67	3.68	3.69	3.70	3.71	3.72	3.73	3.74	3.75	3.76	3.77	3.78	3.79	3.80	3.81	3.82	3.83	3.84	3.85	3.86	3.87	3.88	3.89	3.90
Date	2019-12-11	2020-01-08	2020-02-05	2020-03-04	2020-04-01	2020-04-29	2020-05-27	2020-06-24	2020-07-22	2020-08-19	2020-09-16	2020-10-14	2020-11-11	2020-12-09	2021-01-06	2021-02-03	2021-03-03	2021-03-31	2021-04-28	2021-05-26	2021-06-23	2021-07-21	2021-08-18	2021-09-15	2021-10-13	2021-11-10	2021-12-08	2022-01-05	2022-02-02	2022-03-02	2022-03-30	2022-04-27	2022-05-25	2022-06-22	2022-07-20	2022-08-17	2022-10-12	2022-11-09	2022-12-07	2023-01-04	2023-02-01	2023-03-01	2023-03-29	2023-04-26	2023-05-24	2023-06-21	2023-07-19	2023-08-16	2023-09-13	2023-10-11	2023-11-08	2023-12-06	2024-01-03	2024-01-03	2024-01-31	2024-02-28	2024-03-27	2024-04-24	2024-05-22	2024-06-19	2024-07-17	2024-08-14	2024-09-11	2024-10-09	2024-11-06
Status	New id, no parents	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.

Annotations: 10x8 Sarcin-Ricin; G-bulge (3)
Basepair signature: cWW-tSH-tHH-cSH-tWH-tHS-R-L-cWW-L-cWW
Heat map statistics: Min 0.09 | Avg 0.07 | Max 0.12

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