#SLoop idPDBDisc#Non-coreChain(s) 1 2 3 4break 5 6 71-72-63-43-64-5
1 IL_1X8W_0091X8W0.59070AG331U403U404G405*C316U317C318cWWcWW
2 IL_1S72_0721S720.000000G2090G2091G2092G2093*U2652A2653C2654cWWcWWcSHcWW
3 IL_3U5H_0713U5H0.376805G1618A1619U1620A1621*U1824G1825C1826cWWcSWcWW
4 IL_3NPB_0043NPB0.36810AC45A46A47C48*G77U78G79cWWntSHncSHcWW
5 IL_1J2B_0031J2B0.43990DG944A945G946G947*C926G927C928ncWWcWW
6 IL_4A1B_0934A1B0.441601G2386C2387G2388G2389*U2974A2975C2976cWWcWWcSHcWW
7 IL_3U5H_0963U5H0.504605G2391C2392G2393G2394*U2986A2987C2988cWWcWWcSHcWW
8 IL_3U5H_0123U5H0.545615G237A238G239G241*U177U178C179ncWWncWWcSHcWW
9 IL_2ZJR_0592ZJR0.55001XG1503G1504U1505A1507*U1515A1516C1517cWWcWWcWW
10 IL_4A1B_0894A1B0.803011G2201A2202A2203G2205*C2230G2231C2232cWWncWWncSHcWW
11 IL_2DER_0012DER0.91490CC4C5C6U7*A66G67G68ncWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
GCGG*UAC2
GUUG*CUC1
GGGG*UAC1
GAUA*UGC1
CAAC*GUG1
GAGG*CGC1
GAGUG*UUC1
GGUCA*UAC1
GAAUG*CGC1
CCCU*AGG1
Non-Watson-Crick part of the motif
SequenceCounts
CG*A2
UU*U1
GG*A1
AU*G1
AA*U1
AG*G1
AGU*U1
GUC*A1
AAU*G1
CC*G1
Annotations
  • (11)
  • Basepair signature
    07_cWW-cWW-cSH-cWW
    Heat map statistics
    Min 0.12 | Avg 0.54 | Max 0.96
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