Motif IL_37914.1 Version IL_37914.1 of this group appears in releases 1.15 to 1.15
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 1-3 | 1-9 | 2-4 | 2-5 | 2-8 | 4-9 | 5-8 | 6-7 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_1S72_036 | 1S72 | 0.0000 | 3 | 0 | LSU rRNA | G | 958 | C | 959 | A | 961 | C | 962 | C | 963 | G | 964 | * | C | 1004 | A | 1005 | C | 1008 | tSW | cWW | cSH | ntSW | tWH | cWS | cWW | cWW |
| 2 | IL_4CUX_056 | 4CUX | 0.3330 | 2 | 2 | SSU rRNA | U | 1617 | C | 1618 | C | 1619 | C | 1620 | U | 1621 | G | 1622 | * | C | 1156 | A | 1157 | A | 1160 | ncSH | ncWW | ncWS | ncWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GCGACCG*CAAAC | 1 |
| CACCA*UCCCUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CGACC*AAA | 1 |
| ACC*CCCU | 1 |
Release history
| Release | 1.15 |
|---|---|
| Date | 2014-06-20 |
| Status | New id, 1 parent |
Parent motifs
| Parent motif | Common motif instances | Only in IL_37914.1 | Only in the parent motif |
|---|---|---|---|
| IL_41791.1 Compare | IL_1S72_036 | IL_4CUX_056 |
Children motifs
| Child motif | Common motif instances | Only in IL_37914.1 | Only in the child motif |
|---|---|---|---|
| IL_37914.2 Compare | IL_1S72_036, IL_4CUX_056 | IL_1VWW_070 |
- Annotations
-
- (2)
- Basepair signature
- cWW-tWH-L-cWS-cWW-cWW
- Heat map statistics
- Min 0.33 | Avg 0.17 | Max 0.33
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