#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5 6 7break 8 91-97-8
1 IL_3P59_0013P590.55980A+BRNA (15-mer) + RNA (10-mer)G52A53A54C55U56A57C58*G110C111cWWcWW
2 IL_2NOK_0012NOK0.00000A+BRNA (24-mer) + RNA (20-mer)G52A53A54C55U56A57C58*G110C111cWWcWW
3 IL_2NOK_0052NOK0.22470C+DRNA (24-mer) + RNA (20-mer)G52A53A54C55U56A57C58*G110C111cWWcWW
4 IL_2PN4_0022PN40.47550A+BRNA (24-mer) + RNA (20-mer)G52A53A54C55U56A57C58*G110C111cWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
GAACUAC*GC4
Non-Watson-Crick part of the motif
SequenceCounts
AACUA*4

Release history

Release1.01.11.21.31.41.51.61.71.81.91.101.111.121.131.141.151.171.18
Date2013-03-042013-04-082013-05-042013-06-012013-07-012013-08-032013-08-312013-09-282013-11-052013-12-072014-01-042014-02-012014-03-012014-03-292014-04-272014-06-202014-09-042014-10-07
StatusUpdated, 2 parentsExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

Children motifs

This motif has no children motifs.
Annotations
  • (4)
  • Basepair signature
    cWW-L-L-L-L-L-cWW
    Heat map statistics
    Min 0.22 | Avg 0.39 | Max 0.80
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