Motif IL_41412.1 Version IL_41412.1 of this group appears in releases 0.1 to 0.4
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 1-9 | 5-8 | 6-7 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | IL_1S72_059 | 1S72 | 0.0000 | 1 | 0 | LSU rRNA | G | 1728 | A | 1729 | C | 1731 | A | 1732 | A | 1733 | C | 1734 | * | G | 2045 | G | 2046 | C | 2047 | cWW | tHS | cWW |
2 | IL_2ZJR_060 | 2ZJR | 0.2524 | 0 | X | LSU rRNA | G | 1668 | A | 1669 | G | 1670 | A | 1671 | A | 1672 | C | 1673 | * | G | 1987 | A | 1988 | C | 1989 | cWW | tHS | cWW |
3 | IL_3F1H_061 | 3F1H | 0.2728 | 0 | A | 23S RRNA | G | 1651 | A | 1652 | G | 1653 | A | 1654 | A | 1655 | C | 1656 | * | G | 2004 | A | 2005 | C | 2006 | cWW | tHS | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
GAGAAC*GAC | 2 |
GAGCAAC*GGC | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
AGAA*A | 2 |
AGCAA*G | 1 |
Release history
Release | 0.1 | 0.2 | 0.3 | 0.4 |
---|---|---|---|---|
Date | 2011-12-08 | 2011-12-08 | 2011-12-08 | 2011-12-08 |
Status | New id, no parents | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
Child motif | Common motif instances | Only in IL_41412.1 | Only in the child motif |
---|---|---|---|
IL_19771.1 Compare | IL_1S72_059, IL_2ZJR_060 | IL_3F1H_061 | IL_2QBG_062, IL_3PYO_059 |
Coloring options: