#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5 6break 7 8 91-95-86-7
1 IL_1S72_0591S720.000010 LSU rRNAG1728A1729C1731A1732A1733C1734*G2045G2046C2047cWWtHScWW
2 IL_2ZJR_0602ZJR0.25240X LSU rRNAG1668A1669G1670A1671A1672C1673*G1987A1988C1989cWWtHScWW
3 IL_3F1H_0613F1H0.27280A23S RRNAG1651A1652G1653A1654A1655C1656*G2004A2005C2006cWWtHScWW

3D structures

Complete motif including flanking bases
SequenceCounts
GAGAAC*GAC2
GAGCAAC*GGC1
Non-Watson-Crick part of the motif
SequenceCounts
AGAA*A2
AGCAA*G1

Release history

Release0.10.20.30.4
Date2011-12-082011-12-082011-12-082011-12-08
StatusNew id, no parentsExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

Child motifCommon motif instancesOnly in IL_41412.1Only in the child motif
IL_19771.1
Compare
IL_1S72_059, IL_2ZJR_060IL_3F1H_061IL_2QBG_062, IL_3PYO_059
Annotations
  • (3)
  • Basepair signature
    Heat map statistics
    Min 0.11 | Avg 0.14 | Max 0.27
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