#SLoop idPDBDisc#Non-coreChain(s) 1 2 3 4 5 6break 7 8 91-95-86-7
1 IL_2QBG_0622QBG0.46460BG1651A1652G1653A1654A1655C1656*G2004A2005C2006cWWtHScWW
2 IL_1S72_0591S720.113010G1728A1729C1731A1732A1733C1734*G2045G2046C2047cWWtHScWW
3 IL_3UXR_0613UXR0.00000AG1651A1652G1653A1654A1655C1656*G2004A2005C2006cWWtHScWW
4 IL_2XZM_0482XZM0.10030AG963G964G965A966U967C968*G992U993C994cWWncWwcWW
5 IL_2ZJR_0602ZJR0.26300XG1668A1669G1670A1671A1672C1673*G1987A1988C1989cWWtHScWW

3D structures

Complete motif including flanking bases
SequenceCounts
GAGAAC*GAC3
GAGCAAC*GGC1
GGGAUC*GUC1
Non-Watson-Crick part of the motif
SequenceCounts
AGAA*A3
AGCAA*G1
GGAU*U1

Release history

Release0.6
Date2012-04-02
StatusNew id, 2 parents

Parent motifs

Children motifs

Child motifCommon motif instancesOnly in IL_45262.1Only in the child motif
IL_45262.2
Compare
IL_2XZM_048, IL_2QBG_062, IL_1S72_059, IL_2ZJR_060IL_3UXR_061IL_3V2F_061
Annotations
  • (5)
  • Basepair signature
    09_cWW----tHS-cWW
    Heat map statistics
    Min 0.10 | Avg 0.24 | Max 0.53
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