#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5break 6 7 81-85-6
1 IL_8KAL_0088KAL0.15252A tracrRNAC40A41A42G43U45*A26G27G29ncWWcWW
2 IL_6AEG_0016AEG0.09162A tracrRNAC40A41A42G43U45*A26G27G29cWWcWW
3 IL_5VW1_0015VW10.08272C tracrRNAC40A41A42G43U45*A26G27G29cWWcWW
4 IL_7Z4D_0017Z4D0.09332A tracrRNAC40A41A42G43U45*A26G27G29cWWcWW
5 IL_7ZO1_0017ZO10.04622A tracrRNAC40A41A42G43U45*A26G27G29cWWcWW
6 IL_7QQP_0017QQP0.04352A tracrRNAC40A41A42G43U45*A26G27G29cWWcWW
7 IL_7QQX_0017QQX0.00002A tracrRNAC40A41A42G43U45*A26G27G29cWWcWW
8 IL_7QR0_0017QR00.03552A tracrRNAC40A41A42G43U45*A26G27G29cWWcWW
9 IL_5FQ5_0015FQ50.04032A tracrRNAC40A41A42G43U45*A26G27G29cWWcWW
10 IL_5B2T_0015B2T0.04102A tracrRNAC40A41A42G43U45*A26G27G29cWWcWW
11 IL_7QR8_0017QR80.04852A tracrRNAC40A41A42G43U45*A26G27G29cWWcWW
12 IL_4ZT0_0034ZT00.11262D tracrRNAC40A41A42G43U45*A26G27G29cWWcWW
13 IL_5F9R_0015F9R0.12072A tracrRNAC58A59A60G61U63*A26G27G29cWWcWW
14 IL_8KAH_0028KAH0.16002I+A tracrRNAC40A41A42G43U45*A26G27G29ncWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
CAAGUU*AGAG14
Non-Watson-Crick part of the motif
SequenceCounts
AAGU*GA14

Release history

Release3.893.90
Date2024-10-092024-11-06
StatusUpdated, 2 parentsExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (14)
  • Basepair signature
    cWW-cWW-L-R-cWW-L
    Heat map statistics
    Min 0.04 | Avg 0.10 | Max 0.20
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