#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2break 3 41-42-3
1 IL_3U5F_0863U5F0.00001618S rRNAU1656G1658*U1743A1744cWWcWW
2 IL_1S72_0931S720.33353Bulged stacked bases (H)0 LSU rRNAA2746G2750*U2732U2733cWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
UUG*UA1
ACGUG*UU1
Non-Watson-Crick part of the motif
SequenceCounts
U*1
CGU*1

Release history

Release1.91.101.11
Date2013-12-072014-01-042014-02-01
StatusNew id, 1 parentExact matchExact match

Parent motifs

Parent motifCommon motif instancesOnly in IL_47475.1Only in the parent motif
IL_39674.1
Compare
IL_3U5F_086, IL_1S72_093IL_1KXK_003, IL_3V2F_082

Children motifs

Child motifCommon motif instancesOnly in IL_47475.1Only in the child motif
IL_47875.1
Compare
IL_3U5F_086IL_1S72_093IL_2AW7_029, IL_1FJG_022
IL_63253.1
Compare
IL_1S72_093IL_3U5F_086
Annotations
  • Bulged stacked bases (H) (1)
  • (1)
  • Basepair signature
    cWW-cWW
    Heat map statistics
    Min 0.33 | Avg 0.17 | Max 0.33
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