#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4 5 6 7break 8 9 10 11 12 13 141-143-123-134-115-106-97-8
1 IL_1S72_0011S720.00000Triple sheared with non-canonical cWW (H)0 LSU rRNAG21U22G23G24A25U26U27*A516U517G518A519A520A521U522cWWtSHtSHtHScWwcWW
2 IL_2ZJR_0012ZJR0.17030X LSU rRNAG24U25G26G27A28U29G30*C520U521G522A523A524A525C526cWWtSHtSHcWwcWW
3 IL_3F1H_0013F1H0.20710A23S RRNAG24U25G26G27A28U29G30*C510U511G512A513A514A515C516cWWtSHncSWtSHntHScWwcWW

3D structures

Complete motif including flanking bases
SequenceCounts
GUGGAUG*CUGAAAC2
GUGGAUU*AUGAAAU1
Non-Watson-Crick part of the motif
SequenceCounts
UGGAU*UGAAA3

Release history

Release0.10.20.30.4
Date2011-12-082011-12-082011-12-082011-12-08
StatusNew id, no parentsExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

Child motifCommon motif instancesOnly in IL_53203.1Only in the child motif
IL_29583.1
Compare
IL_1S72_001IL_2ZJR_001, IL_3F1H_001IL_2QBG_006, IL_3PYO_001
IL_99755.1
Compare
IL_2ZJR_001IL_1S72_001, IL_3F1H_001
Annotations
  • (2)
  • Triple sheared with non-canonical cWW (H) (1)
  • Basepair signature
    Heat map statistics
    Min 0.14 | Avg 0.12 | Max 0.21
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