Motif IL_57079.1 Version IL_57079.1 of this group appears in releases 1.15 to 1.15
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 8 | 1-4 | 1-5 | 1-8 | 4-5 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4BPP_076 | 4BPP | 0 | 5 | A | 18S RRNA | G | 1459 | U | 1460 | U | 1462 | C | 1465 | * | G | 1485 | U | 1486 | A | 1487 | C | 1490 | ncSs | tSS | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUAUUUC*GUAAUC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UAUUU*UAAU | 1 |
Release history
| Release | 1.15 |
|---|---|
| Date | 2014-06-20 |
| Status | New id, 1 parent |
Parent motifs
| Parent motif | Common motif instances | Only in IL_57079.1 | Only in the parent motif |
|---|---|---|---|
| IL_16977.1 Compare | IL_4BPP_076 | IL_3U5F_077 |
Children motifs
| Child motif | Common motif instances | Only in IL_57079.1 | Only in the child motif |
|---|---|---|---|
| IL_06692.1 Compare | IL_4BPP_076 | IL_3U5F_077 |
- Annotations
-
- (1)
- Basepair signature
- cWW-tSS-cSS-L-cSS-R-L-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: