Motif IL_58809.1 Version IL_58809.1 of this group appears in releases 3.80 to 3.90
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | break | 15 | 16 | 17 | 18 | 19 | 1-19 | 4-18 | 11-19 | 12-16 | 14-15 | |||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_8C3A_105 | 8C3A | 0.0000 | 3 | Kink-turn related | 1 | LSU rRNA | C | 2454 | G | 2455 | C | 2456 | C | 2457 | G | 2458 | U | 2460 | G | 2461 | A | 2462 | A | 2463 | A | 2464 | A | 2466 | C | 2467 | A | 2469 | C | 2470 | * | G | 2443 | G | 2444 | G | 2445 | A | 2446 | G | 2447 | cWW | ncWWa | tSs | ncSW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGCCGGUGAAAUACCAC*GGGAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GCCGGUGAAAUACCA*GGA | 1 |
Release history
| Release | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 | 3.87 | 3.88 | 3.89 | 3.90 |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2024-01-31 | 2024-02-28 | 2024-03-27 | 2024-04-24 | 2024-05-22 | 2024-06-19 | 2024-07-17 | 2024-08-14 | 2024-09-11 | 2024-10-09 | 2024-11-06 |
| Status | New id, no parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Kink-turn related (1)
- Basepair signature
- cWW-tSS-L-R-L-R-L-R-L-cWW-L-L-R-L-R-L-L-R
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: