Motif IL_58811.1 Version IL_58811.1 of this group appears in releases 0.11 to 0.12
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | 1-9 | 2-8 | 4-7 | 5-6 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4A1B_029 | 4A1B | 0.0000 | 1 | 1 | 26S RRNA | G | 704 | A | 705 | U | 706 | A | 707 | G | 708 | * | C | 721 | G | 722 | C | 724 | C | 725 | cWW | tHW | tHS | cWW | |
| 2 | IL_4A1B_075 | 4A1B | 0.9384 | 2 | 1 | 26S RRNA | U | 1763 | G | 1764 | U | 1765 | A | 1766 | G | 1768 | * | C | 1726 | U | 1727 | A | 1728 | G | 1730 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAUAG*CGUCC | 1 |
| UGUAUG*CUAUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AUA*GUC | 1 |
| GUAU*UAU | 1 |
Release history
Parent motifs
| Parent motif | Common motif instances | Only in IL_58811.1 | Only in the parent motif |
|---|---|---|---|
| IL_93782.1 Compare | IL_4A1B_029 | IL_4A1B_075 | IL_3V2F_026 |
| IL_37737.1 Compare | IL_4A1B_075 | IL_4A1B_029 | IL_3U5F_007 |
Children motifs
| Child motif | Common motif instances | Only in IL_58811.1 | Only in the child motif |
|---|---|---|---|
| IL_06635.1 Compare | IL_4A1B_075 | IL_4A1B_029 | IL_3U5F_007 |
| IL_79870.1 Compare | IL_4A1B_029 | IL_4A1B_075 | IL_3V2F_026 |
- Annotations
- Basepair signature
- cWW-L-R-R-L-L-cWW
- Heat map statistics
- Min 0.94 | Avg 0.47 | Max 0.94
Coloring options: