#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4 5 6break 7 8 9 10 11 121-122-113-104-95-86-7
1 IL_8SSW_0038SSW0.29510C+DRNA (28-MER)C11G12C13A14A15G16*C11G12C13A14A15G16cWWcWHncWWancWWcWHcWW
2 IL_6O5F_0016O5F0.00000C+DRNA (23-mer)C11G12C13A14A15G16*C11G12C13A14A15G16cWWncWWncWWacWWcWHcWW
3 IL_4EYA_0054EYA0.39330Tandem non-canonical cWW pairs with near WC pairsh+gRNA (12-mer)C5C6U7U8G9G10*C5C6U7U8G9G10cWWncWWncwWncWWncWS
4 IL_7A0S_0187A0S0.85990Triple sheared with non-canonical cWWX LSU rRNAG736C737G738G739A740G741*U716G717A718A719A720C721cWWncWWtSHntSHntHScWW

3D structures

Complete motif including flanking bases
SequenceCounts
CGCAAG*CGCAAG2
CCUUGG*CCUUGG1
GCGGAG*UGAAAC1
Non-Watson-Crick part of the motif
SequenceCounts
GCAA*GCAA2
CUUG*CUUG1
CGGA*GAAA1

Release history

Release3.88
Date2024-09-11
StatusNew id, 2 parents

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (2)
  • Tandem non-canonical cWW pairs with near WC pairs (1)
  • Triple sheared with non-canonical cWW (1)
  • Basepair signature
    cWW-L-R-L-R-L-R-L-R-cWW
    Heat map statistics
    Min 0.30 | Avg 0.47 | Max 0.86
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