#SLoop idPDBDisc#Non-coreAnnotationChain(s) 1 2 3 4 5 6 7break 8 9 10 11 12 13 141-142-133-123-134-115-106-97-810-11
1 IL_4V9F_0014V9F0.13490Triple sheared with non-canonical cWW0G21U22G23G24A25U26U27*A516U517G518A519A520A521U522cWWtSHtSHtHScWwcWW
2 IL_4V8P_1464V8P0.08730Triple sheared with non-canonical cWW (H)C2+D1G16U17G18G19A20U21A22*U401U402G403A404A405A406C407cWWtSHncSWtSHntHScWwcWW
3 IL_4Y4O_1794Y4O0.06040Triple sheared with non-canonical cWW (H)2AG24U25G26G27A28U29G30*C510U511G512A513A514A515C516cWWntSHtSHtSHntHScWwcWW
4 IL_5J7L_2455J7L0.00000Triple sheared with non-canonical cWWDAG24U25G26G27A28U29G30*C510U511G512A513A514A515C516cWWntSHtSHtSHtHScWwcWW
5 IL_4WF9_0014WF90.05650Triple sheared with non-canonical cWWXG24U25G26G27A28U29G30*C555U556G557A558A559A560C561cWWntSHtSHtSHtHScWwcWW
6 IL_4IOA_0014IOA0.07900Triple sheared with non-canonical cWW (H)XG24U25G26G27A28U29G30*C520U521G522A523A524A525C526cWWntSHtSHtSHtHScWwcWW
7 IL_4V5O_0934V5O0.64911tWH-tWH-tHW-tHW (H)BAG137G138A139U140A141A142C143*G159C160U161A162A163A165C166cWWcWWntWWntHWcWWncWH

3D structures

Complete motif including flanking bases
SequenceCounts
GUGGAUG*CUGAAAC4
GUGGAUU*AUGAAAU1
GUGGAUA*UUGAAAC1
GGAUAAC*GCUAAUAC1
Non-Watson-Crick part of the motif
SequenceCounts
UGGAU*UGAAA6
GAUAA*CUAAUA1

Release history

Release3.2
Date2018-09-26
StatusNew id, no parents

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • Triple sheared with non-canonical cWW (H) (3)
  • Triple sheared with non-canonical cWW (3)
  • tWH-tWH-tHW-tHW (H) (1)
  • Basepair signature
    cWW-L-R-tSH-tSH-tHS-cWW-cWW
    Heat map statistics
    Min 0.06 | Avg 0.22 | Max 0.69
    Help

    Coloring options:

    Copyright 2025 BGSU RNA group. Page generated in 0.3574 s