#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4 5break 6 7 8 91-92-73-43-84-85-6
1 IL_5XTM_0085XTM0.17600DRNA (47-MER)C41U42A43A44G45*U3A4U5G6cWWtWHcSHntSHcWWcWW
2 IL_5DCV_0105DCV0.12280DRNA (47-MER)C45U46A47A48G49*U3A4U5G6cWWtWHcSHntSHcWWcWW
3 IL_3IGI_0123IGI0.10690Receptor of 11-nt loop-receptor motifAGroup IIC intronC346U347A348A349G350*U332A333U334G335cWWtWHcSHncWWcWW
4 IL_1GID_0141GID0.09780BP4-P6 RNA RIBOZYME DOMAINC223U224A225A226G227*U247A248U249G250cWWtWHcSHncWWcWW
5 IL_1U6B_0131U6B0.00000B197-MERC147U148A149A150G151*U160A161U162G163cWWtWHcSHcWWcWW
6 IL_5VCI_0065VCI0.11610A+BRNA (22-mer) + RNA (12-mer)C8U9A10A11G12*U2A3U4G5cWWtWHcSHcWWcWW
7 IL_4PCJ_0054PCJ0.13120AtrCUG-3('5)C8U9A10A11G12*U25A26U27G28cWWtWHcSHcWWcWW
8 IL_1U6B_0031U6B0.18190Receptor of 11-nt loop-receptor motifB197-MERC61U62A63A64G65*U80A81U82G83cWWtWHcSHncWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
CUAAG*UAUG8
Non-Watson-Crick part of the motif
SequenceCounts
UAA*AU8

Release history

Release3.883.893.90
Date2024-09-112024-10-092024-11-06
StatusNew id, 1 parentExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (6)
  • Receptor of 11-nt loop-receptor motif (2)
  • Basepair signature
    cWW-tWH-cWW-cSH-cWW
    Heat map statistics
    Min 0.07 | Avg 0.13 | Max 0.23
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