#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5 6 7 8 9break 10 11 12 13 14 15 16 171-172-163-154-145-136-128-119-109-11
1 IL_3BBM_0023BBM0.05193B+CLoop A and Loop B Ribozyme strand + Loop B S-turn strandG19A20G21A22A23A24C25A26C27*G35G36C38A40U41A43C44C45cWWcWWatSHtHWtHWcWWcWW
2 IL_2P7E_0012P7E0.00003C+DRibozyme strand II + Ribozyme strand IIIG19A20G21A22A23A24C25A26C27*G35G36A38A40U41A43C44C45cWWcWWatSHtHWtHWcWWcWW
3 IL_3GS5_0023GS50.06393CRNA (36-MER)G31A32G33A34A35A36C37A38C39*G48G49A51A53U54A56C57C58cWWcWWatSHtHWncBWntWHcWWcWW
4 IL_1M5K_0031M5K0.38353BRNA HAIRPIN RIBOZYMEG19A20G21A22A23A24C25A26C27*G54G55A57A59U60A62C63C64cWWcWWatSHtHWtHWcWWcWWncWW

3D structures

Complete motif including flanking bases
SequenceCounts
GAGAAACAC*GGUACAUUACC2
GAGAAACAC*GGUCCAUUACC1
GAGAAACAC*GGUAUAUUACC1
Non-Watson-Crick part of the motif
SequenceCounts
AGAAACA*GUACAUUAC2
AGAAACA*GUCCAUUAC1
AGAAACA*GUAUAUUAC1

Release history

Release3.33.43.53.63.73.83.93.103.23.113.123.133.143.153.163.173.183.193.203.213.223.233.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.613.623.633.643.653.663.673.683.693.703.713.723.733.743.753.763.773.783.793.803.813.823.833.843.853.863.873.88
Date2018-03-082018-04-062018-05-042018-06-012018-06-292018-07-272018-08-242018-09-212018-09-262018-10-192018-11-162018-12-142019-01-112019-02-082019-03-082019-04-052019-05-032019-05-312019-06-282019-07-262019-08-232019-09-192019-10-162019-11-132019-12-112020-01-082020-02-052020-03-042020-04-012020-04-292020-05-272020-06-242020-07-222020-08-192020-09-162020-10-142020-11-112020-12-092021-01-062021-02-032021-03-032021-03-312021-04-282021-05-262021-06-232021-07-212021-08-182021-09-152021-10-132021-11-102021-12-082022-01-052022-02-022022-03-022022-03-302022-04-272022-05-252022-06-222022-07-202022-08-172022-10-122022-11-092022-12-072023-01-042023-02-012023-03-012023-03-292023-04-262023-05-242023-06-212023-07-192023-08-162023-09-132023-10-112023-11-082023-12-062024-01-032024-01-032024-01-312024-02-282024-03-272024-04-242024-05-222024-06-192024-07-172024-08-142024-09-11
StatusExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchNew id, no parentsExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (4)
  • Basepair signature
    cWW-cWW-tSH-tHW-tHW-L-R-L-cWW-cWW
    Heat map statistics
    Min 0.05 | Avg 0.17 | Max 0.39
    Help

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