#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5 6 7 8 9break 10 11 12 13 14 15 16 171-172-163-154-145-136-128-119-109-11
1 IL_1M5K_0031M5K0.09913BRNA HAIRPIN RIBOZYMEG19A20G21A22A23A24C25A26C27*G54G55A57A59U60A62C63C64cWWcWWatSHtHWtHWcWWcWWncWW
2 IL_3GS5_0023GS50.06393CRNA (36-MER)G31A32G33A34A35A36C37A38C39*G48G49A51A53U54A56C57C58cWWcWWatSHtHWncBWntWHcWWcWW
3 IL_2P7E_0012P7E0.00003C+DRibozyme strand II + Ribozyme strand IIIG19A20G21A22A23A24C25A26C27*G35G36A38A40U41A43C44C45cWWcWWatSHtHWtHWcWWcWW
4 IL_3BBM_0023BBM0.05193B+CLoop A and Loop B Ribozyme strand + Loop B S-turn strandG19A20G21A22A23A24C25A26C27*G35G36C38A40U41A43C44C45cWWcWWatSHtHWtHWcWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
GAGAAACAC*GGUACAUUACC2
GAGAAACAC*GGUAUAUUACC1
GAGAAACAC*GGUCCAUUACC1
Non-Watson-Crick part of the motif
SequenceCounts
AGAAACA*GUACAUUAC2
AGAAACA*GUAUAUUAC1
AGAAACA*GUCCAUUAC1

Release history

Release3.33.43.53.63.73.83.93.103.23.113.123.133.143.153.163.173.183.193.203.213.223.233.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.613.623.633.643.653.663.673.683.693.703.713.723.733.743.753.763.773.783.793.803.813.823.833.843.853.863.873.883.893.90
Date2018-03-082018-04-062018-05-042018-06-012018-06-292018-07-272018-08-242018-09-212018-09-262018-10-192018-11-162018-12-142019-01-112019-02-082019-03-082019-04-052019-05-032019-05-312019-06-282019-07-262019-08-232019-09-192019-10-162019-11-132019-12-112020-01-082020-02-052020-03-042020-04-012020-04-292020-05-272020-06-242020-07-222020-08-192020-09-162020-10-142020-11-112020-12-092021-01-062021-02-032021-03-032021-03-312021-04-282021-05-262021-06-232021-07-212021-08-182021-09-152021-10-132021-11-102021-12-082022-01-052022-02-022022-03-022022-03-302022-04-272022-05-252022-06-222022-07-202022-08-172022-10-122022-11-092022-12-072023-01-042023-02-012023-03-012023-03-292023-04-262023-05-242023-06-212023-07-192023-08-162023-09-132023-10-112023-11-082023-12-062024-01-032024-01-032024-01-312024-02-282024-03-272024-04-242024-05-222024-06-192024-07-172024-08-142024-09-112024-10-092024-11-06
StatusExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchNew id, no parentsExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (4)
  • Basepair signature
    cWW-cWW-tSH-tHW-tHW-L-R-L-cWW-cWW
    Heat map statistics
    Min 0.05 | Avg 0.07 | Max 0.11
    Help

    Coloring options:

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