Motif IL_69668.1 Version IL_69668.1 of this group appears in releases 1.17 to 1.17
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 1-13 | 2-12 | 4-9 | 5-8 | 6-7 | 10-11 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3U5H_080 | 3U5H | 0.0000 | 0 | 5 | 25S rRNA | U | 1702 | U | 1703 | A | 1704 | U | 1705 | C | 1706 | A | 1707 | * | U | 1737 | C | 1738 | U | 1739 | U | 1740 | A | 1741 | U | 1742 | G | 1743 | cWW | cwW | tHW | ncBW | cWW | ncSH |
| 2 | IL_4CUV_079 | 4CUV | 0.2386 | 0 | 1 | 25S RRNA | U | 1702 | U | 1703 | A | 1704 | U | 1705 | C | 1706 | A | 1707 | * | U | 1737 | C | 1738 | U | 1739 | U | 1740 | A | 1741 | U | 1742 | G | 1743 | cWW | cwW | tHW | ncBW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UUAUCA*UCUUAUG | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UAUC*CUUAU | 2 |
Release history
| Release | 1.17 |
|---|---|
| Date | 2014-09-04 |
| Status | New id, 1 parent |
Parent motifs
| Parent motif | Common motif instances | Only in IL_69668.1 | Only in the parent motif |
|---|---|---|---|
| IL_89252.2 Compare | IL_4CUV_079, IL_3U5H_080 | IL_1VW3_094, IL_1VW3_051 |
Children motifs
| Child motif | Common motif instances | Only in IL_69668.1 | Only in the child motif |
|---|---|---|---|
| IL_06584.1 Compare | IL_4CUV_079, IL_3U5H_080 | IL_1VW3_051, IL_4R0D_015 |
- Annotations
-
- (2)
- Basepair signature
- cWW-cWW-L-R-R-tHW-bif-cWW
- Heat map statistics
- Min 0.24 | Avg 0.12 | Max 0.24
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