Motif IL_69835.1 Version IL_69835.1 of this group appears in releases 0.5 to 0.5
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 1-7 | 4-7 | 5-6 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_2ZJR_047 | 2ZJR | 0 | 1 | C-loop (H) | X | LSU rRNA | G | 1332 | G | 1333 | A | 1334 | A | 1335 | G | 1336 | * | C | 1344 | C | 1346 | cWW | ncWS | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GGAAG*CGC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GAA*G | 1 |
Release history
| Release | 0.5 |
|---|---|
| Date | 2011-12-08 |
| Status | New id, 1 parent |
Parent motifs
| Parent motif | Common motif instances | Only in IL_69835.1 | Only in the parent motif |
|---|---|---|---|
| IL_45778.1 Compare | IL_2ZJR_047 | IL_3F1H_049, IL_1FJG_013, IL_1S72_051 |
Children motifs
| Child motif | Common motif instances | Only in IL_69835.1 | Only in the child motif |
|---|---|---|---|
| IL_54307.1 Compare | IL_2ZJR_047 | IL_4A1C_005, IL_3UXR_048, IL_3UXR_029, IL_3UXR_100, IL_2AW7_018, IL_1FJG_047, IL_3U5H_042, IL_2QBG_102, IL_3U5F_060, IL_2XZM_059, IL_2ZJR_028, IL_1S72_091, IL_1FJG_015, IL_1KOG_008, IL_1KOG_006, IL_1KOG_007, IL_1KOG_004, IL_1KOG_005, IL_1KOG_002, IL_1KOG_003, IL_4A1B_046, IL_1KOG_001, IL_2QBG_033, IL_1S72_051, IL_2QBG_050, IL_2ZJR_096 |
- Annotations
-
- C-loop (H) (1)
- Basepair signature
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: