#SLoop idPDBDisc#Non-coreChain(s) 1 2 3 4 5break 6 7 8 9 101-31-104-105-66-9
1 IL_2QBG_0042QBG0.42190AA34C35C36C37C38*G44A45A46C47U48ncSHcWWcWScWWtSW
2 IL_1MJI_0021MJI0.19500CA34C35C36C37C38*G44A45A46C47U48ntSWcWWcWScWWtSW
3 IL_4A1C_0074A1C0.187503A32U33C34C35C36*G41A42A43C44U45cWWcWWtSW
4 IL_1S72_1021S720.000009U33A34C35C36C37*G43A44A45C46A47cSHcWWcWScWWtSW
5 IL_3V2F_1103V2F0.11680BU34U35C36C37C38*G44A45A46C47A48ncSHcWWcWScWWtSW
6 IL_3U5H_1473U5H0.201207U32U33C34C35C36*G41A42U43C44A45ncSHcWWcWScWWtSW

3D structures

Complete motif including flanking bases
SequenceCounts
ACCCC*GAACU2
AUCCC*GAACU1
UACCC*GAACA1
UUCCC*GAACA1
UUCCC*GAUCA1
Non-Watson-Crick part of the motif
SequenceCounts
CCC*AAC2
UCC*AAC2
ACC*AAC1
UCC*AUC1

Release history

Release0.70.80.90.100.110.121.01.11.21.31.41.51.61.71.81.91.101.111.121.13
Date2013-02-172013-02-172013-02-172013-02-172013-02-172013-02-172013-03-042013-04-082013-05-042013-06-012013-07-012013-08-032013-08-312013-09-282013-11-052013-12-072014-01-042014-02-012014-03-012014-03-29
StatusUpdated, 2 parentsExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

Children motifs

Child motifCommon motif instancesOnly in IL_70237.3Only in the child motif
IL_70237.4
Compare
IL_1S72_102, IL_4A1C_007, IL_3U5H_147, IL_2QBG_004, IL_1MJI_002IL_3V2F_110IL_4NVV_110
Annotations
  • (6)
  • Basepair signature
    cWW-L-L-cWS-tSW-R-R-cWW
    Heat map statistics
    Min 0.12 | Avg 0.23 | Max 0.48
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