#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name for chain 1 2 3 4 5break 6 7 8 9 101-102-82-93-73-84-75-6
1 IL_4LFB_0654LFB0.59090Triple non-canonical cWW pairsA SSU rRNAG713G714A715A716C717*G673G674A675A676U677ncWWacWWncwWcWWcWW
2 IL_8B0X_1768B0X0.60230Triple non-canonical cWW pairs (H)A SSU rRNAG713G714A715A716U717*A673G674A675A676U677cWWacWWncwWcWWcWW
3 IL_8D29_0108D290.54940Partly complementaryCRNA (34-MER)G27C28A29G30C31*G4A5U6A7C8cWWncWWncWWcWWcWW
4 IL_8P9A_3498P9A0.54890AR LSU rRNAC3162A3163C3164A3165C3166*G3284C3285G3286U3287G3288cWWncWWncWWacWW
5 IL_7VYX_0047VYX0.49120Partly complementaryCsgRNAU37U38A39U40C41*G21G22A23U24G25ncWWncwWncwWncWWacWW
6 IL_7VYX_0087VYX0.39170Partly complementaryCsgRNAG11A12C13U14U15*G51U52G53C54C55cWWncWWancWWncWwncWWa
7 IL_8VMA_0048VMA0.12890Triple non-canonical cWW pairsCEnterovirus 5' cloverleaf cis-acting replication elementA71C72U73U74G75*C51U52C53C54U55cWWncwWncWWcWwcWW
8 IL_8VM8_0038VM80.08490Triple non-canonical cWW pairsREnterovirus 5' cloverleaf cis-acting replication elementC54U55C56U57G58*C74U75U76U77G78cWWcwWcWWcWwcWW
9 IL_8VM9_0048VM90.00000Triple non-canonical cWW pairsREnterovirus 5' cloverleaf cis-acting replication elementC48U49C50U51G52*C68U69U70U71G72cWWcwWncWWcWWcWwcWW
10 IL_5BTM_0015BTM0.21060Triple non-canonical cWW pairsARNA (55-mer)U10U11C12U13A14*U42U43C44U45A46cWWncWWcwWncWwcwWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
CUCUG*CUUUG2
GGAAC*GGAAU1
GGAAU*AGAAU1
GCAGC*GAUAC1
CACAC*GCGUG1
UUAUC*GGAUG1
GACUU*GUGCC1
ACUUG*CUCCU1
UUCUA*UUCUA1
Non-Watson-Crick part of the motif
SequenceCounts
GAA*GAA2
UCU*UUU2
CAG*AUA1
ACA*CGU1
UAU*GAU1
ACU*UGC1
CUU*UCC1
UCU*UCU1

Release history

Release4.0
Date2025-08-13
StatusNew id, 1 parent

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • Triple non-canonical cWW pairs (5)
  • Partly complementary (3)
  • Triple non-canonical cWW pairs (H) (1)
  • (1)
  • Basepair signature
    cWW-cWW-cWW-cWW-cWW
    Heat map statistics
    Min 0.06 | Avg 0.40 | Max 0.64
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