#SLoop idPDBDisc#Non-coreAnnotationChain(s) 1 2 3break 4 51-52-53-4
1 IL_1S72_0661S720.00001Minor groove platform, major groove intercalation (H)0C1893A1895G1896*C1943G1944cWWcWW
2 IL_3Q1Q_0033Q1Q0.36342BG103A106G107*C209C210cWWcWScWW

3D structures

Complete motif including flanking bases
SequenceCounts
CCAG*CG1
GACAG*CC1
Non-Watson-Crick part of the motif
SequenceCounts
CA*1
ACA*1

Release history

Release0.5
Date2011-12-08
StatusNew id, 1 parent

Parent motifs

Parent motifCommon motif instancesOnly in IL_71985.1Only in the parent motif
IL_87014.1
Compare
IL_1S72_066IL_3Q1Q_003IL_1FJG_039, IL_3F1H_068, IL_2ZJR_027, IL_2ZJR_003, IL_3F1H_056, IL_2ZJR_067, IL_1FJG_051

Children motifs

Child motifCommon motif instancesOnly in IL_71985.1Only in the child motif
IL_94430.1
Compare
IL_3Q1Q_003, IL_1S72_066IL_2QBG_072, IL_3UXR_032, IL_2AW7_046, IL_3UXR_055, IL_2ZJR_105, IL_2AW7_007, IL_3UXR_068, IL_2ZJR_067, IL_4A1B_086, IL_2XXA_013, IL_2XXA_006, IL_3U5H_145
Annotations
  • Minor groove platform, major groove intercalation (H) (1)
  • (1)
  • Basepair signature
    Heat map statistics
    Min 0.36 | Avg 0.18 | Max 0.36
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