#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3break 4 5 61-62-63-4
1 IL_4ERD_0034ERD0.85242C+DRNA (22-mer)G146G147A148*U119C120C123cWWntSscWW
2 IL_2ZI0_0012ZI00.00000Isolated near basepairC+DRNA (21-mer)U9U10A11*U9U10A11cWWcWW
3 IL_4J39_0014J390.76580CC cWWBRNA (19-mer)G9C10C11*G9||||4_555C10||||4_555C11||||4_555cWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
GGA*UCGAC1
UUA*UUA1
GCC*GCC1
Non-Watson-Crick part of the motif
SequenceCounts
G*CGA1
U*U1
C*C1

Release history

Release1.14
Date2014-04-27
StatusNew id, 1 parent

Parent motifs

Parent motifCommon motif instancesOnly in IL_72641.1Only in the parent motif
IL_17212.2
Compare
IL_4ERD_003, IL_4J39_001, IL_2ZI0_001IL_1S72_046, IL_3U5H_052, IL_3U5H_062, IL_4IOA_043, IL_2QBG_045, IL_3V2F_030, IL_3V2F_042, IL_3V2F_025

Children motifs

Child motifCommon motif instancesOnly in IL_72641.1Only in the child motif
IL_72641.2
Compare
IL_4ERD_003, IL_2ZI0_001IL_4J39_001IL_4CUX_020
IL_92886.1
Compare
IL_4J39_001IL_4ERD_003, IL_2ZI0_001
Annotations
  • Isolated near basepair (1)
  • (1)
  • CC cWW (1)
  • Basepair signature
    cWW-L-R-cWW
    Heat map statistics
    Min 0.77 | Avg 0.56 | Max 0.89
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