#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5break 6 7 8 91-92-84-75-6
1 IL_1FJG_0081FJG0.00000A SSU rRNAC132U133A134C135C136*G227A228U229G230cWWcwWcWW
2 IL_3F1H_0253F1H1.08880A23S RRNAC846U847G848A849C850*G928G929U930G931cWWtHScWW

3D structures

Complete motif including flanking bases
SequenceCounts
CUACC*GAUG1
CUGAC*GGUG1
Non-Watson-Crick part of the motif
SequenceCounts
UAC*AU1
UGA*GU1

Release history

Release0.20.3
Date2011-12-082011-12-08
StatusNew id, 2 parentsExact match

Parent motifs

Parent motifCommon motif instancesOnly in IL_73748.1Only in the parent motif
IL_16858.1
Compare
IL_1FJG_008IL_3F1H_025IL_429D_002, IL_2O3V_002
IL_87473.1
Compare
IL_3F1H_025IL_1FJG_008

Children motifs

Child motifCommon motif instancesOnly in IL_73748.1Only in the child motif
IL_75673.1
Compare
IL_1FJG_008IL_3F1H_025IL_3BNQ_008, IL_3BNQ_002, IL_2O3V_002, IL_1FJG_055
IL_80837.1
Compare
IL_3F1H_025IL_1FJG_008
Annotations
  • (2)
  • Basepair signature
    Heat map statistics
    Min 1.09 | Avg 0.54 | Max 1.09
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