#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3break 4 5 6 71-31-41-73-44-5
1 IL_6CZR_1616CZR0.33283 1a SSU rRNAG1237A1238G1240*C1259A1261U1263C1264ncSScWWcWW
2 IL_5J7L_0555J7L0.00003 AA SSU rRNAG1255A1256G1258*C1277G1279C1281C1282ncSScWWcWW
3 IL_4LFB_0524LFB0.38143 A SSU rRNAG1255A1256G1258*C1277A1279U1281C1282cWWcWW
4 IL_4V88_4604V880.70446 A6 SSU rRNAG1488U1489C1494*G1513A1515U1517C1518tSScWWcWWcSS

3D structures

Complete motif including flanking bases
SequenceCounts
GAUG*CUAAUC2
GAAG*CGGACC1
GUCUAAC*GUAAUC1
Non-Watson-Crick part of the motif
SequenceCounts
AU*UAAU2
AA*GGAC1
UCUAA*UAAU1

Release history

Release3.183.193.203.213.223.233.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.613.623.633.643.653.663.673.683.693.703.713.723.733.743.753.76
Date2019-05-032019-05-312019-06-282019-07-262019-08-232019-09-192019-10-162019-11-132019-12-112020-01-082020-02-052020-03-042020-04-012020-04-292020-05-272020-06-242020-07-222020-08-192020-09-162020-10-142020-11-112020-12-092021-01-062021-02-032021-03-032021-03-312021-04-282021-05-262021-06-232021-07-212021-08-182021-09-152021-10-132021-11-102021-12-082022-01-052022-02-022022-03-022022-03-302022-04-272022-05-252022-06-222022-07-202022-08-172022-10-122022-11-092022-12-072023-01-042023-02-012023-03-012023-03-292023-04-262023-05-242023-06-212023-07-192023-08-162023-09-132023-10-112023-11-08
StatusUpdated, 1 parentExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
Basepair signature
cWW-cSS-L-R-R-cWW
Heat map statistics
Min 0.33 | Avg 0.41 | Max 0.70
Help

Coloring options:

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