Motif IL_78493.3 Version IL_78493.3 of this group appears in releases 0.5 to 0.5
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 10 | 11 | 12 | 1-12 | 2-11 | 4-9 | 5-8 | 6-7 | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_2ZJR_064 | 2ZJR | 0.0000 | 1 | X | C | 1703 | G | 1704 | U | 1705 | A | 1706 | A | 1707 | C | 1708 | * | G | 1713 | A | 1714 | A | 1715 | A | 1717 | A | 1718 | G | 1719 | cWW | tSH | tHH | ntHS | cWW |
| 2 | IL_1S72_063 | 1S72 | 0.1158 | 1 | 0 | C | 1764 | G | 1765 | U | 1766 | A | 1767 | C | 1768 | C | 1769 | * | G | 1774 | A | 1775 | A | 1776 | A | 1778 | A | 1779 | G | 1780 | cWW | tSH | tHH | tHS | cWW |
| 3 | IL_2QBG_066 | 2QBG | 0.1665 | 1 | B | C | 1686 | G | 1687 | U | 1688 | A | 1689 | A | 1690 | C | 1691 | * | G | 1696 | G | 1697 | A | 1698 | A | 1700 | A | 1701 | G | 1702 | cWW | tSH | tHH | tHS | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGUAAC*GAAGAAG | 1 |
| CGUACC*GAAGAAG | 1 |
| CGUAAC*GGAGAAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GUAA*AAGAA | 1 |
| GUAC*AAGAA | 1 |
| GUAA*GAGAA | 1 |
Release history
| Release | 0.5 |
|---|---|
| Date | 2011-12-08 |
| Status | Updated, 1 parent |
Parent motifs
| Parent motif | Common motif instances | Only in IL_78493.3 | Only in the parent motif |
|---|---|---|---|
| IL_78493.2 Compare | IL_1S72_063, IL_2ZJR_064 | IL_2QBG_066 | IL_3F1H_065 |
Children motifs
| Child motif | Common motif instances | Only in IL_78493.3 | Only in the child motif |
|---|---|---|---|
| IL_72158.1 Compare | IL_1S72_063, IL_2ZJR_064, IL_2QBG_066 | IL_3U5H_086, IL_4A1B_082 |
Coloring options: