Motif IL_82426.4 Version IL_82426.4 of this group appears in releases 3.77 to 3.92

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Pairwise interactions
Sequence variants
History

#S	Loop id	PDB	Disc	#Non-core	Annotation	Chain(s)	Standardized name		1		2		3		4		5		6		7		8		9	break		10		11		12		13		14	1-14	2-6	3-8	4-7	6-12	7-11	9-10
1	IL_4KZD_005	4KZD	0.1204	2	Part of G-quadruplex	R	RNA (84-MER)	A	53	G	54	U	55	G	57	A	58	G	59	G	61	U	62	G	63	*	C	25	G	26	G	27	G	28	U	29	cWW	cHW		cHW	cHW	cHW	cWW
2	IL_4TS2_006	4TS2	0.0000	2	Part of G-quadruplex	Y+X	Spinach aptamer RNA, bimolecular construct	A	64	G	65	U	66	G	68	A	69	G	70	G	72	U	73	G	74	*	C	28	G	29	G	30	G	31	U	32	cWW	cHW	ntSW	cHW	cHW	cHW	cWW
3	IL_7L0Z_003	7L0Z	0.0673	2	Part of G-quadruplex	G	RNA (69-MER)	A	45	G	46	U	47	G	49	A	50	G	51	G	53	U	54	G	55	*	C	18	G	19	G	20	G	21	U	22	cWW	cHW		cHW	cHW	cHW	cWW

3D structures

Complete motif including flanking bases

Sequence	Counts
AGUAGAGUGUG*CGGGU	3

Non-Watson-Crick part of the motif

Sequence	Counts
GUAGAGUGU*GGG	3

Release history

Release	3.77	3.78	3.79	3.80	3.81	3.82	3.83	3.84	3.85	3.86	3.87	3.88	3.89	3.90	3.91	3.92
Date	2023-12-06	2024-01-03	2024-01-03	2024-01-31	2024-02-28	2024-03-27	2024-04-24	2024-05-22	2024-06-19	2024-07-17	2024-08-14	2024-09-11	2024-10-09	2024-11-06	2024-12-04	2025-01-01
Status	Updated, 1 parent	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.

Annotations: Part of G-quadruplex (3)
Basepair signature: cWW-cHW-R-L-cHW-cHW-cHW-L-cWW-R
Heat map statistics: Min 0.07 | Avg 0.07 | Max 0.13

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