Motif IL_82519.1 Version IL_82519.1 of this group appears in releases 1.0 to 1.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | break | 11 | 12 | 13 | 1-13 | 3-9 | 6-7 | 6-8 | 10-11 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_1S72_071 | 1S72 | 0 | 3 | 0 | LSU rRNA | C | 1975 | G | 1976 | U | 1977 | A | 1978 | U | 1980 | A | 1981 | C | 1982 | C | 1983 | U | 1984 | G | 1986 | * | C | 2002 | U | 2003 | G | 2005 | cWW | cwW | ncSH | ntSW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGUAGUACCUUG*CUUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GUAGUACCUU*UU | 1 |
Release history
| Release | 1.0 |
|---|---|
| Date | 2013-03-04 |
| Status | New id, 1 parent |
Parent motifs
| Parent motif | Common motif instances | Only in IL_82519.1 | Only in the parent motif |
|---|---|---|---|
| IL_89028.3 Compare | IL_1S72_071 | IL_2QBG_077, IL_4A1B_092 |
Children motifs
| Child motif | Common motif instances | Only in IL_82519.1 | Only in the child motif |
|---|---|---|---|
| IL_89028.5 Compare | IL_1S72_071 | IL_2QBG_077, IL_4A1B_092 |
- Annotations
-
- (1)
- Basepair signature
- cWW-L-R-cWW-L-L-tSW-L-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: