#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5break 6 7 8 91-92-84-75-6
1 IL_4A1B_0294A1B0.00001126S RRNAG704A705U706A707G708*C721G722C724C725cWWtHWtHScWW
2 IL_4NVV_0284NVV0.92350A23S Ribosomal RNAC893U894G895A896C897*G973G974U975G976cWWtHScWW

3D structures

Complete motif including flanking bases
SequenceCounts
GAUAG*CGUCC1
CUGAC*GGUG1
Non-Watson-Crick part of the motif
SequenceCounts
AUA*GUC1
UGA*GU1

Release history

Release1.14
Date2014-04-27
StatusNew id, 1 parent

Parent motifs

Parent motifCommon motif instancesOnly in IL_87064.1Only in the parent motif
IL_87507.1
Compare
IL_4A1B_029IL_4NVV_028IL_3V2F_026

Children motifs

Child motifCommon motif instancesOnly in IL_87064.1Only in the child motif
IL_14901.1
Compare
IL_4A1B_029IL_4NVV_028IL_1J2B_001
IL_56250.1
Compare
IL_4NVV_028IL_4A1B_029IL_4A1B_097
Annotations
  • (2)
  • Basepair signature
    cWW-L-R-L-tHS-cWW
    Heat map statistics
    Min 0.92 | Avg 0.46 | Max 0.92
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