#SLoop idPDBDisc#Non-coreChain(s)Standardized name for chain 1 2 3 4break 5 6 7 8 91-92-83-64-5
1 IL_4A1B_0754A1B0.00002126S RRNAC1726U1727A1728G1730*U1763G1764U1765A1766G1768cWWcWW
2 IL_4A1B_0294A1B0.93841126S RRNAC721G722C724C725*G704A705U706A707G708cWWtSHtWHcWW

3D structures

Complete motif including flanking bases
SequenceCounts
CUAUG*UGUAUG1
CGUCC*GAUAG1
Non-Watson-Crick part of the motif
SequenceCounts
UAU*GUAU1
GUC*AUA1

Release history

Release1.18
Date2014-10-07
StatusNew id, 2 parents

Parent motifs

Parent motifCommon motif instancesOnly in IL_87433.1Only in the parent motif
IL_17204.2
Compare
IL_4A1B_075IL_4A1B_029IL_4CUV_129, IL_3CUN_001
IL_38488.1
Compare
IL_4A1B_029IL_4A1B_075IL_1Y0Q_002

Children motifs

This motif has no children motifs.
Annotations
  • (2)
  • Basepair signature
    cWW-L-R-R-R-L-cWW
    Heat map statistics
    Min 0.94 | Avg 0.47 | Max 0.94
    Help

    Coloring options:

    IL_4A1B_075:IL_4A1B_075 = 0IL_4A1B_075:IL_4A1B_029 = 0.9384IL_4A1B_029:IL_4A1B_075 = 0.9384IL_4A1B_029:IL_4A1B_029 = 0IL_4A1B_075IL_4A1B_029Discrepancy0.000.200.400.600.80
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