Motif IL_90880.1 Version IL_90880.1 of this group appears in releases 0.7 to 1.0

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Pairwise interactions
Sequence variants
History

#S	Loop id	PDB	Disc	#Non-core	Chain(s)	Standardized name		1		2		3		4		5		6	break		7		8		9		10		11		12		13		14		15		16		17		18		19		20	1-20	2-19	4-9	5-8	6-7
1	IL_3V2F_040	3V2F	0	3	A	23S Ribosomal RNA	G	1024	G	1025	A	1027	A	1028	A	1029	G	1030	*	C	1124	G	1125	A	1126	A	1128	A	1129	G	1131	A	1132	U	1133	C	1135	G	1136	G	1137	G	1138	G	1139	C	1140	cWW	tWW	tHH	tHS	cWW

3D structures

Complete motif including flanking bases

Sequence	Counts
GGUAAAG*CGAAAAUGAUCGGGGC	1

Non-Watson-Crick part of the motif

Sequence	Counts
GUAAA*GAAAAUGAUCGGGG	1

Release history

Release	0.7	0.8	0.9	0.10	0.11	0.12	1.0
Date	2013-02-17	2013-02-17	2013-02-17	2013-02-17	2013-02-17	2013-02-17	2013-03-04
Status	New id, no parents	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match

Parent motifs

This motif has no parent motifs.

Children motifs

Child motif	Common motif instances	Only in IL_90880.1	Only in the child motif
IL_33964.1 Compare	IL_3V2F_040		IL_4IOA_036

Annotations: (1)
Basepair signature: cWW-tWW-L-tWH-R-R-R-R-R-R-R-tHH-tHS-cWW
Heat map statistics: Min 0.00 | Avg 0.00 | Max 0.00

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