Motif IL_90880.1 Version IL_90880.1 of this group appears in releases 0.7 to 1.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 18 | 19 | 20 | 1-20 | 2-19 | 4-9 | 5-8 | 6-7 | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3V2F_040 | 3V2F | 0 | 3 | A | G | 1024 | G | 1025 | A | 1027 | A | 1028 | A | 1029 | G | 1030 | * | C | 1124 | G | 1125 | A | 1126 | A | 1128 | A | 1129 | G | 1131 | A | 1132 | U | 1133 | C | 1135 | G | 1136 | G | 1137 | G | 1138 | G | 1139 | C | 1140 | cWW | tWW | tHH | tHS | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GGUAAAG*CGAAAAUGAUCGGGGC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GUAAA*GAAAAUGAUCGGGG | 1 |
Release history
| Release | 0.7 | 0.8 | 0.9 | 0.10 | 0.11 | 0.12 | 1.0 |
|---|---|---|---|---|---|---|---|
| Date | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-03-04 |
| Status | New id, no parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
| Child motif | Common motif instances | Only in IL_90880.1 | Only in the child motif |
|---|---|---|---|
| IL_33964.1 Compare | IL_3V2F_040 | IL_4IOA_036 |
- Annotations
-
- (1)
- Basepair signature
- cWW-tWW-L-tWH-R-R-R-R-R-R-R-tHH-tHS-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: