#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4 5break 6 7 8 9 101-102-93-84-75-6
1 IL_8C3A_1148C3A0.31220Triple sheared (H)1 LSU rRNAU2807C2808A2809A2810G2811*C2821G2822A2823C2824A2825cWWtSHtHScWW
2 IL_5TBW_1065TBW0.11050Triple sheared1 LSU rRNAU2835C2836A2837A2838G2839*C2849G2850A2851C2852A2853cWWntSHtHScWW
3 IL_5J7L_3385J7L0.00000Triple shearedDA LSU rRNAC2466C2467A2468A2469G2470*C2480G2481A2482C2483G2484cWWcWBntSHtHScWW
4 IL_4WF9_0934WF90.12480Triple shearedX LSU rRNAC2493C2494A2495A2496G2497*C2507G2508A2509C2510G2511cWWcWBtSHntHScWW
5 IL_7A0S_0877A0S0.13990Triple shearedX LSU rRNAC2445C2446G2447A2448G2449*C2459G2460G2461C2462G2463cWWncWBtHScWW
6 IL_8VTW_0948VTW0.20660Triple sheared (H)1A LSU rRNAC2466C2467G2468A2469G2470*C2480G2481G2482C2483G2484cWWcWBtHScWW
7 IL_4V9F_0854V9F0.23520Triple sheared0 LSU rRNAG2501C2502A2503A2504G2505*C2515G2516A2517C2518C2519cWWcWBntSHtHScWW
8 IL_1U6B_0021U6B0.29430Triple shearedB197-MERG84C85A86A87C88*G56A57A58A59C60cWWncWWtSHtHScWW

3D structures

Complete motif including flanking bases
SequenceCounts
UCAAG*CGACA2
CCAAG*CGACG2
CCGAG*CGGCG2
GCAAG*CGACC1
GCAAC*GAAAC1
Non-Watson-Crick part of the motif
SequenceCounts
CAA*GAC5
CGA*GGC2
CAA*AAA1

Release history

Release3.88
Date2024-09-11
StatusNew id, 1 parent

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • Triple sheared (6)
  • Triple sheared (H) (2)
  • Basepair signature
    cWW-L-R-tSH-tHS-cWW
    Heat map statistics
    Min 0.07 | Avg 0.23 | Max 0.41
    Help

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