#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4 5 6break 7 8 9 10 111-112-103-95-86-7
1 IL_1S72_0191S720.46130 0 LSU rRNAA562C563G564A565A566U567*A591G592A593C594U595cWWcWBtHScWW
2 IL_1S72_0941S720.18951 0 LSU rRNAG2772G2773U2774A2775A2776G2777*C2797G2798A2799A2801C2802cWWcWWtWHtHScWW
3 IL_3V2F_1033V2F0.08461 A23S Ribosomal RNAG2737A2738U2739A2740A2741C2742*G2762G2763A2764G2766C2767cWWcWWtWHtHScWW
4 IL_2ZJR_0992ZJR0.00001 X LSU rRNAG2717A2718U2719A2720A2721C2722*G2742G2743A2744G2746C2747cWWcWWtWHtHScWW
5 IL_4A1B_0544A1B0.16271 126S RRNAG1193A1194U1195A1196A1197G1198*C1355G1356A1357A1359C1360cWWcwWtWHtHScWW
6 IL_2QBG_1052QBG0.17371 B23S rRNAG2737A2738U2739A2740A2741G2742*C2762G2763A2764A2766C2767cWWcwWtWHtHScWW

3D structures

Complete motif including flanking bases
SequenceCounts
GAUAAC*GGAAGC2
ACGAAU*AGACU1
GGUAAG*CGAAAC1
GAUAAG*CGAUAC1
GAUAAG*CGAAAC1
Non-Watson-Crick part of the motif
SequenceCounts
AUAA*GAAG2
CGAA*GAC1
GUAA*GAAA1
AUAA*GAUA1
AUAA*GAAA1

Release history

Release0.70.80.90.100.110.121.0
Date2013-02-172013-02-172013-02-172013-02-172013-02-172013-02-172013-03-04
StatusUpdated, 1 parentExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

Parent motifCommon motif instancesOnly in IL_97057.2Only in the parent motif
IL_97057.1
Compare
IL_1S72_019, IL_2QBG_105, IL_1S72_094, IL_2ZJR_099, IL_4A1B_054IL_3V2F_103IL_3UXR_103

Children motifs

Child motifCommon motif instancesOnly in IL_97057.2Only in the child motif
IL_97057.3
Compare
IL_1S72_019, IL_2QBG_105, IL_4A1B_054, IL_1S72_094, IL_3V2F_103IL_2ZJR_099IL_4IOA_100
Annotations
Basepair signature
cWW-cWW-tWH-L-tHS-cWW
Heat map statistics
Min 0.08 | Avg 0.24 | Max 0.52
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