#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2break 3 4 5 6 71-41-72-32-5
1 IL_3U5H_1233U5H0.78392525S rRNAA3091A3094*U3047A3048A3049U3050U3051tHHcWWcWW
2 IL_1FJG_0131FJG0.00000C-loop (H)A SSU rRNAG292G293*U304G305G306C307C308cWWcWWntSH
3 IL_2AW7_0162AW70.35650A16S ribosomal RNAG292G293*U304G305A306C307C308cWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
ACCA*UAAUU1
GG*UGGCC1
GG*UGACC1
Non-Watson-Crick part of the motif
SequenceCounts
CC*AAU1
*GGC1
*GAC1

Release history

Release1.14
Date2014-04-27
StatusUpdated, 2 parents

Parent motifs

Parent motifCommon motif instancesOnly in IL_98421.5Only in the parent motif
IL_98421.4
Compare
IL_1FJG_013, IL_2AW7_016IL_3U5H_123IL_4BPP_023
IL_39355.1
Compare
IL_3U5H_123IL_1FJG_013, IL_2AW7_016IL_4A1B_119

Children motifs

Child motifCommon motif instancesOnly in IL_98421.5Only in the child motif
IL_98421.6
Compare
IL_1FJG_013, IL_2AW7_016, IL_3U5H_123IL_4CUV_128
Annotations
  • (2)
  • C-loop (H) (1)
  • Basepair signature
    cWW-R-R-R-cWW
    Heat map statistics
    Min 0.36 | Avg 0.43 | Max 0.80
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