#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3break 4 5 61-62-53-4
1 IL_3F1H_0293F1H0.31240A23S RRNAU905G906U907*A870U871A872cWWncWScWW
2 IL_1S72_0461S720.00001Isolated cWS basepair (H)0 LSU rRNAC1301G1302C1303*G1351C1353G1354cWWcWScWW
3 IL_2ZJR_0412ZJR0.18311Isolated cWS basepair (H)X LSU rRNAC1210G1211U1212*A1260U1262G1263cWWcWScWW

3D structures

Complete motif including flanking bases
SequenceCounts
AUA*UGU1
CGC*GACG1
CGU*AGUG1
Non-Watson-Crick part of the motif
SequenceCounts
U*G1
G*AC1
G*GU1

Release history

Release0.20.30.4
Date2011-12-082011-12-082011-12-08
StatusNew id, 1 parentExact matchExact match

Parent motifs

Parent motifCommon motif instancesOnly in IL_99336.1Only in the parent motif
IL_51068.1
Compare
IL_1S72_046, IL_2ZJR_041, IL_3F1H_029IL_3F1H_024, IL_2ZI0_001

Children motifs

Child motifCommon motif instancesOnly in IL_99336.1Only in the child motif
IL_33144.1
Compare
IL_1S72_046, IL_2ZJR_041IL_3F1H_029IL_2AW7_049, IL_1FJG_041, IL_3PYO_029, IL_2QBG_045
Annotations
  • Isolated cWS basepair (H) (2)
  • (1)
  • Basepair signature
    Heat map statistics
    Min 0.18 | Avg 0.19 | Max 0.36
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