#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4break 5 6 7break 8 9 10 111-112-103-64-57-8
1 J3_4V88_0364V880.00000A6 SSU rRNAU1168G1169G1170A1171*U1468A1469C1470*G1574G1575A1576A1577cWWtSHcWWcWWcWW
2 J3_4LFB_0034LFB0.10490A SSU rRNAU943G944G945A946*U1235A1236C1237*G1337G1338A1339A1340cWWtSHcWWcWWcWW
3 J3_5J7L_0055J7L0.10580AA SSU rRNAU943G944G945A946*U1235A1236C1237*G1337G1338A1339A1340cWWtSHcWWcWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
UGGA*UAC*GGAA3
Non-Watson-Crick part of the motif
SequenceCounts
GG*A*GA3

Release history

Release3.23.33.43.53.63.73.83.93.103.113.123.133.143.153.163.173.183.193.203.213.223.233.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.613.623.633.643.653.663.673.683.693.703.713.723.733.743.753.763.773.783.79
Date2018-02-092018-03-082018-04-062018-05-042018-06-012018-06-292018-07-272018-08-242018-09-212018-10-192018-11-162018-12-142019-01-112019-02-082019-03-082019-04-052019-05-032019-05-312019-06-282019-07-262019-08-232019-09-192019-10-162019-11-132019-12-112020-01-082020-02-052020-03-042020-04-012020-04-292020-05-272020-06-242020-07-222020-08-192020-09-162020-10-142020-11-112020-12-092021-01-062021-02-032021-03-032021-03-312021-04-282021-05-262021-06-232021-07-212021-08-182021-09-152021-10-132021-11-102021-12-082022-01-052022-02-022022-03-022022-03-302022-04-272022-05-252022-06-222022-07-202022-08-172022-10-122022-11-092022-12-072023-01-042023-02-012023-03-012023-03-292023-04-262023-05-242023-06-212023-07-192023-08-162023-09-132023-10-112023-11-082023-12-062024-01-032024-01-03
StatusNew id, no parentsExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (3)
  • Basepair signature
    cWW-tSH-cWW-F-cWW-cWW
    Heat map statistics
    Min 0.08 | Avg 0.06 | Max 0.11
    Help

    Coloring options:

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