#SLoop idPDBDisc#Non-coreChain(s)Standardized name for chain 1 2 3 4 5 6 7 8 9break 10 11 12 13 14break 15 16 17 18 19 20 21 221-226-127-119-1010-1914-1516-20
1 J3_4V88_0374V880.10763A6 SSU rRNAG1198G1200A1202A1204C1205U1206C1207A1208C1209*G1454G1455C1456C1457G1458*C1180U1181U1182A1183A1184U1185U1186U1187cWWcWWtsScWWtWWa
2 J3_4LFB_0044LFB0.00003A SSU rRNAG973A974A977C979C980U981U982A983C984*G1221G1222C1223G1224A1225*U955U956U957A958A959U960U961C962cWWncWWcWWtsScWWtWWa
3 J3_5J7L_0065J7L0.07643AA SSU rRNAG973A974A977C979C980U981U982A983C984*G1221G1222C1223U1224A1225*U955U956U957A958A959U960U961C962cWWncWWncWWcWWtsScWWtWWa

3D structures

Complete motif including flanking bases
SequenceCounts
CUUAAUUU*GGGGAAACUCAC*GGCCG1
UUUAAUUC*GAAGAACCUUAC*GGCGA1
UUUAAUUC*GAAGAACCUUAC*GGCUA1
Non-Watson-Crick part of the motif
SequenceCounts
UUAAUU*GGGAAACUCA*GCC1
UUAAUU*AAGAACCUUA*GCG1
UUAAUU*AAGAACCUUA*GCU1

Release history

Release3.23.33.43.53.63.73.83.93.103.113.123.133.143.153.163.173.183.193.203.213.223.233.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.613.623.633.643.653.663.673.683.693.703.713.723.733.743.753.763.773.783.79
Date2018-02-092018-03-082018-04-062018-05-042018-06-012018-06-292018-07-272018-08-242018-09-212018-10-192018-11-162018-12-142019-01-112019-02-082019-03-082019-04-052019-05-032019-05-312019-06-282019-07-262019-08-232019-09-192019-10-162019-11-132019-12-112020-01-082020-02-052020-03-042020-04-012020-04-292020-05-272020-06-242020-07-222020-08-192020-09-162020-10-142020-11-112020-12-092021-01-062021-02-032021-03-032021-03-312021-04-282021-05-262021-06-232021-07-212021-08-182021-09-152021-10-132021-11-102021-12-082022-01-052022-02-022022-03-022022-03-302022-04-272022-05-252022-06-222022-07-202022-08-172022-10-122022-11-092022-12-072023-01-042023-02-012023-03-012023-03-292023-04-262023-05-242023-06-212023-07-192023-08-162023-09-132023-10-112023-11-082023-12-062024-01-032024-01-03
StatusNew id, no parentsExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (3)
  • Basepair signature
    cWW-F-F-F-tWW-F-tSH-tSS-F-F-F-F-F-cWW-cWW-F-F-F
    Heat map statistics
    Min 0.08 | Avg 0.07 | Max 0.13
    Help

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