11HE Summary
- Structure title
- Rabbit 60S ribosomal subunit with eEF2 domain IV closed
- Authors
- Seraj, Z., Zottig, X., Huang, C.H., Loveland, A.B., Diggs, S., Sholi, E., Grigorieff, N., Korostelev, A.A.
- Release date
- 2026-09-02
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
- Chains
- 4 RNA chains from Oryctolagus cuniculus
- 46 other chains
- Nucleic acid compounds
- Other compounds
- 28S rRNA, 5S rRNA, 5.8S rRNA, ES27L
- Ribosomal protein L10, 60S ribosomal protein L11, Large ribosomal subunit protein eL13, 60S ribosomal protein L14, 60S ribosomal protein L15, 60S ribosomal protein L17, 60S ribosomal protein L19, Large ribosomal subunit protein eL20, 60S ribosomal protein L21, Large ribosomal subunit protein eL22, 60S ribosomal protein L23, Ribosomal protein L24, 60S ribosomal protein L26, 60S ribosomal protein L27, Large ribosomal subunit protein eL29, 60S ribosomal protein L30, 60S ribosomal protein L31, Large ribosomal subunit protein eL32, 60S ribosomal protein L34, 60S ribosomal protein L35, 60S ribosomal protein L36, 60S ribosomal protein L37, Large ribosomal subunit protein eL38, 60S ribosomal protein L39, Large ribosomal subunit protein eL40, eL42, Proliferation-associated protein 2G4, 60S ribosomal protein L3, 60S ribosomal protein L4, 60S ribosomal protein L5, large ribosomal subunit protein eL6, 60S ribosomal protein L7, 60S ribosomal protein L8, 60S ribosomal protein L9, Large ribosomal subunit protein eL18, Large ribosomal subunit protein eL8, Large ribosomal subunit protein uL13, Large ribosomal subunit protein uL23, 60S ribosomal protein L27a, Large ribosomal subunit protein eL33, 60S ribosomal protein L37a, 60S ribosomal protein L28, 60S acidic ribosomal protein P0, uL11, 60S ribosomal protein L10a, Elongation factor 2
Pairwise Interactions
Interactions annotated by FR3D:- 1,441 base-pairs
- 3,903 base-stacking
- 305 base-phosphate
- 369 base-ribose
- 153 oxygen stacking
- 256 sugar-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 11HE contains:- 68 hairpin loops from 0 motif groups
- 168 internal loops from 0 motif groups
- 47 junction loops from 0 motif groups
3D Redundancy
11HE has chains which belong to the following equivalence classes in the current representative set:- NR_all_06650.51 (1)
- NR_all_10255.51 (1)
- NR_all_53010.1 (1)
- NR_4.0_06650.51 (1)
- NR_4.0_10255.51 (1)
- NR_4.0_53010.1 (1)
- NR_3.5_06650.51 (1)
- NR_3.5_10255.51 (1)
- NR_3.5_53010.1 (1)
- NR_3.0_06650.51 (1)
- NR_3.0_10255.51 (1)
- NR_3.0_53010.1 (1)
- NR_20.0_06650.51 (1)
- NR_20.0_10255.51 (1)
- NR_20.0_53010.1 (1)
Similar structures
8SCB 7O7Z 8RJB 11IQ 8RJD 8RJC 9RHU 8B6C 8B5L 9YQ0 9YQ1 9YPZ 8VVQ 9BDL 9YPW 9YPY 9YPG 8BPO 9YPO 9YPS 9QQA 9YPV 8P2K 7UCK 9YPT 11HV 7NWI 7TOR 8VVP 9BDN 7ZJX 9F1B 9MR4 7TM3 11HG 6P5I 9NDP 8BHF 7OBR 7O81 11JJ 6P5K 7UCJ 6MTD 7TOQ 6MTE 9Q7Q 6P5N 6MTC 6R5Q 9F1D 7MDZ 8VVT 5LZV 11KH 5LZS 6MTB 9QQB 5LZZ 6P5J 7A01 6R6P 8VVR 8VVS 7NWG 7QWQ 8VFT 6ZVK 6D90 7NFX 7QWR 5LZW 7TUT 5LZT 6HCF 9F1C 7NWH 9BDP 8VVV 6D9J 6GZ5 6GZ4 5LZU 6GZ3 6FRK 3JAH 6R6G 5LZY 3JAG 6HCJ 6R7Q 3JAI 8VVU 5LZX 3J92 6FTI 6FTJ 6HCQ 6HCM 7QWS 6T59 4UJE 6FTG 4D67 4D5Y 4UJC 4UJD 3JAJ 3JAN 7O7Y 7ZJW 7O80 6SGC 8BTK 7OYD 9Q1S 9Q2P 9Q2M 9Q1Q 9Q2T 9Q2OStructures from NR_all_06650.51