11HG Summary
- Structure title
- Rabbit 80S with eEF2,CCDC124,and LARP1,40S-head-swiveled
- Authors
- Seraj, Z., Zottig, X., Huang, C.H., Loveland, A.B., Diggs, S., Sholi, E., Grigorieff, N., Korostelev, A.A.
- Release date
- 2026-09-02
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
- Chains
- 5 RNA chains from Oryctolagus cuniculus
- 81 other chains
- Nucleic acid compounds
- Other compounds
- 18S rRNA, 28s rRNA, 5.8S rRNA, 5S rRNA, ES27L
- Ribosomal protein L10, 60S ribosomal protein L11, 60S ribosomal protein L13, 60S ribosomal protein L14, 60S ribosomal protein L15, 60S ribosomal protein L17, 60S ribosomal protein L19, Large ribosomal subunit protein eL20, 60S ribosomal protein L21, Large ribosomal subunit protein eL22, Ribosomal protein L23, 60S ribosomal protein L26, 60S ribosomal protein L27, Large ribosomal subunit protein eL29, 60S ribosomal protein L30, 60S ribosomal protein L31, Large ribosomal subunit protein eL32, 60S ribosomal protein L34, 60S ribosomal protein L35, 60S ribosomal protein L36, 60S ribosomal protein L37, Large ribosomal subunit protein eL38, 60S ribosomal protein L39, Large ribosomal subunit protein eL40, eL41, eL42, Small ribosomal subunit protein uS19, Receptor of activated protein C kinase 1, 40S ribosomal protein S3a, 40S_SA_C domain-containing protein, 40S ribosomal protein S10, Coiled-coil domain-containing protein 124, Small ribosomal subunit protein uS17, 40S ribosomal protein S12, Proliferation-associated protein 2G4, 40S ribosomal protein S13, Small ribosomal subunit protein uS11, Small ribosomal subunit protein uS9, 60S ribosomal protein L3, 60S ribosomal protein L4, 60S ribosomal protein L5, Large ribosomal subunit protein eL6, 60S ribosomal protein L7, 60S ribosomal protein L8, 60S ribosomal protein L9, La-related protein 1, 40S ribosomal protein S18, Small ribosomal subunit protein eS19, 40S ribosomal protein S20, eS21, Large ribosomal subunit protein eL18, uS12, 40S ribosomal protein S17, 40S ribosomal protein S2, Small ribosomal subunit protein uS3, 40S ribosomal protein S4, Small ribosomal subunit protein uS7, 40S ribosomal protein S6, Small ribosomal subunit protein eS7, 40S ribosomal protein S8, 40S ribosomal protein S9, 40S ribosomal protein S24, 40S ribosomal protein S25, eS26, 40S ribosomal protein S27, Ribosomal protein L24, 40S ribosomal protein S28, 40S ribosomal protein S15a, 40S ribosomal protein S29, 40S ribosomal protein S30, 40S ribosomal protein S27a, Large ribosomal subunit protein eL8, Large ribosomal subunit protein uL13, Large ribosomal subunit protein uL23, 60S ribosomal protein L27a, Large ribosomal subunit protein eL33, 60S ribosomal protein L37a, 60S ribosomal protein L28, 60S acidic ribosomal protein P0, uL11, Elongation factor 2
Pairwise Interactions
Interactions annotated by FR3D:- 1,890 base-pairs
- 5,484 base-stacking
- 439 base-phosphate
- 602 base-ribose
- 223 oxygen stacking
- 364 sugar-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 11HG contains:- 102 hairpin loops from 0 motif groups
- 255 internal loops from 0 motif groups
- 67 junction loops from 0 motif groups
3D Redundancy
11HG has chains which belong to the following equivalence classes in the current representative set:- NR_all_06650.51 (1)
- NR_all_10255.51 (1)
- NR_all_53010.1 (1)
- NR_all_21280.52 (1)
- NR_4.0_06650.51 (1)
- NR_4.0_10255.51 (1)
- NR_4.0_53010.1 (1)
- NR_4.0_21280.52 (1)
- NR_3.5_06650.51 (1)
- NR_3.5_10255.51 (1)
- NR_3.5_53010.1 (1)
- NR_3.5_21280.52 (1)
- NR_3.0_06650.51 (1)
- NR_3.0_10255.51 (1)
- NR_3.0_53010.1 (1)
- NR_3.0_21280.52 (1)
- NR_20.0_06650.51 (1)
- NR_20.0_10255.51 (1)
- NR_20.0_53010.1 (1)
- NR_20.0_21280.52 (1)
Similar structures
7O7Z 8SCB 9RHU 9YPZ 9YQ1 9YQ0 7JQB 9YPY 9YPW 7UCK 8VVQ 9QQA 9H6Y 9YPG 9BDL 8P03 9YPO 9YPS 9YPV 7NWI 8P2K 9YPT 9H74 8VVP 11IQ 6W2T 9BDN 9F1B 6P4H 7ZJX 6P4G 8P09 7TOR 7O81 7SYS 6W2S 9NDP 6MTC 6MTD 7UCJ 9MR4 6P5I 9F1D 6P5N 7SYW 5LZV 6MTE 9QQB 7JQC 8BHF 6YAL 6MTB 6P5K 7SYQ 5LZZ 6D90 5LZS 6YAN 6ZVK 8VVR 7NWG 6HCF 7SYR 9F1C 8VVS 7SYX 5LZW 5LZT 7SYN 6R5Q 7MDZ 7SYV 6D9J 9BDP 3JAH 8VVT 6R6P 8VFT 6GZ5 6GZ4 7SYK 5LZU 7SYP 3JAG 6P5J 7SYU 8SUP 7SYG 6GZ3 5LZY 11JJ 7TOQ 6YAM 3JAI 7SYL 9C8K 8VVV 7SYT 6R6G 9UZK 7SYM 7SYJ 11KH 7SYI 7NWH 9UZM 7SYO 7A01 5FLX 6HCJ 9UZL 6R7Q 7SYH 9OGY 5K0Y 5LZX 8VVU 6HCQ 9CPA 6HCM 4KZY 4KZZ 4KZX 4UJE 4D5L 4D61 4UJC 3JAJ 4UJD 3JAN 7O7Y 7ZJW 7O80 6SGC 8BTK 7OYD 9Q2P 9Q1S 9Q1Q 9Q2T 9Q2OStructures from NR_all_21280.52