1NC0 Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_1NC0_019 | 1/A/9:15 | No text annotation | ||
| HL_1NC0_002 | 2/A/9:15 | No text annotation | ||
| HL_1NC0_003 | 3/A/8:16 | No text annotation | ||
| HL_1NC0_004 | 4/A/9:15 | GNRA | geometric HL_4LFB_022 HL_34789.2 | |
| HL_1NC0_005 | 5/A/9:15 | GNRA | geometric HL_4LFB_022 HL_34789.2 | |
| HL_1NC0_006 | 6/A/9:15 | No text annotation | ||
| HL_1NC0_007 | 7/A/8:16 | No text annotation | ||
| HL_1NC0_021 | 8/A/9:15 | No text annotation | ||
| HL_1NC0_009 | 9/A/9:15 | No text annotation | geometric HL_361D_002 NA | |
| HL_1NC0_010 | 10/A/8:16 | No text annotation | ||
| HL_1NC0_011 | 11/A/9:15 | No text annotation | ||
| HL_1NC0_022 | 12/A/9:15 | No text annotation | ||
| HL_1NC0_013 | 13/A/8:16 | No text annotation | ||
| HL_1NC0_014 | 14/A/9:15 | GNRA | geometric HL_4LFB_022 HL_34789.2 | |
| HL_1NC0_015 | 15/A/8:16 | No text annotation | ||
| HL_1NC0_016 | 16/A/8:16 | No text annotation | ||
| HL_1NC0_017 | 17/A/8:16 | No text annotation | ||
| HL_1NC0_023 | 18/A/9:15 | No text annotation |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_1NC0_001 | No text annotation | ||
| HL_1NC0_020 | No text annotation | ||
| HL_1NC0_008 | No text annotation | ||
| HL_1NC0_012 | No text annotation | ||
| HL_1NC0_018 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_1NC0_001 | 1/A/6:7, 1/A/17:19 | Single stack bend | geometric IL_5J7L_032 NA | |
| IL_1NC0_002 | 2/A/6:7, 2/A/17:19 | Single stack bend | geometric IL_5J7L_032 NA | |
| IL_1NC0_003 | 3/A/6:7, 3/A/17:19 | Single stack bend | geometric IL_5J7L_032 NA | |
| IL_1NC0_004 | 4/A/6:7, 4/A/17:19 | Single stack bend | geometric IL_7RQB_058 NA | |
| IL_1NC0_005 | 5/A/6:7, 5/A/17:19 | Single stack bend | geometric IL_7RQB_058 NA | |
| IL_1NC0_006 | 6/A/6:7, 6/A/17:19 | Single stack bend | geometric IL_5J7L_032 NA | |
| IL_1NC0_007 | 7/A/6:7, 7/A/17:19 | Single stack bend | geometric IL_5J7L_269 NA | |
| IL_1NC0_008 | 8/A/6:7, 8/A/17:19 | Single stack bend | geometric IL_5J7L_032 NA | |
| IL_1NC0_009 | 9/A/6:7, 9/A/17:19 | Single stack bend | geometric IL_5J7L_032 NA | |
| IL_1NC0_010 | 10/A/6:7, 10/A/17:19 | Single stack bend | geometric IL_7RQB_058 NA | |
| IL_1NC0_011 | 11/A/6:7, 11/A/17:19 | Single stack bend | geometric IL_7RQB_058 NA | |
| IL_1NC0_012 | 12/A/6:7, 12/A/17:19 | Single stack bend | geometric IL_7RQB_058 NA | |
| IL_1NC0_013 | 13/A/6:7, 13/A/17:19 | Single stack bend | geometric IL_7RQB_058 NA | |
| IL_1NC0_014 | 14/A/6:7, 14/A/17:19 | Single stack bend | geometric IL_5J7L_032 NA | |
| IL_1NC0_015 | 15/A/6:7, 15/A/17:19 | Single stack bend | geometric IL_7RQB_058 NA | |
| IL_1NC0_016 | 16/A/6:7, 16/A/17:19 | Single stack bend | geometric IL_7RQB_058 NA | |
| IL_1NC0_017 | 17/A/6:7, 17/A/17:19 | Single stack bend | geometric IL_7RQB_058 NA | |
| IL_1NC0_018 | 18/A/6:7, 18/A/17:19 | Single stack bend | geometric IL_7RQB_058 NA |
Problematic loops
No problematic loops
Valid loops
No loops found
Problematic loops
No problematic loops
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