3FOZ Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_3FOZ_001 | 1/C/13:22 | tRNA D-loop | geometric HL_3FOZ_004 HL_45175.1 | |
| HL_3FOZ_002 | 1/C/31:39 | No text annotation | geometric HL_3FOZ_005 HL_37569.2 | |
| HL_3FOZ_003 | 1/C/53:61 | T-loop with 2 stacked bulged bases | geometric HL_3FOZ_006 HL_33597.2 | |
| HL_3FOZ_004 | 1/D/13:22 | tRNA D-loop HL_45175.1 | ||
| HL_3FOZ_005 | 1/D/31:39 | No text annotation HL_37569.2 | ||
| HL_3FOZ_006 | 1/D/53:61 | T-loop with 2 stacked bulged bases HL_33597.2 |
Problematic loops
No problematic loops
Valid loops
No loops found
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_3FOZ_001 | Isolated cWH basepair |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J4_3FOZ_001 | 1/C/7:10, 1/C/25:27, 1/C/43:49, 1/C/65:66 | tRNA junction | homologous J4_7EQJ_002 J4_95067.1 | |
| J4_3FOZ_002 | 1/D/7:10, 1/D/25:27, 1/D/43:49, 1/D/65:66 | tRNA junction J4_95067.1 |
Problematic loops
No problematic loops
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