3R1C Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
No loops found
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_3R1C_027 | 1/A/2:4, 1/B/5:7 | Isolated cWH basepair | geometric IL_3R1C_012 IL_10167.5 | |
| IL_3R1C_028 | 1/A/5:7, 1/B/2:4 | Isolated cWH basepair | geometric IL_3CZW_001 IL_10167.5 | |
| IL_3R1C_029 | 1/C/2:4, 1/D/5:7 | Isolated cWH basepair | geometric IL_4J50_003 IL_10167.5 | |
| IL_3R1C_030 | 1/C/5:7, 1/D/2:4 | Isolated cWH basepair | geometric IL_3CZW_001 IL_10167.5 | |
| IL_3R1C_031 | 1/E/2:4, 1/F/5:7 | Isolated cWH basepair | ||
| IL_3R1C_032 | 1/E/5:7, 1/F/2:4 | Isolated cWH basepair | ||
| IL_3R1C_033 | 1/G/2:4, 1/H/5:7 | Isolated cWH basepair | geometric IL_3R1C_032 NA | |
| IL_3R1C_034 | 1/G/5:7, 1/H/2:4 | Isolated cWH basepair | geometric IL_3R1C_031 NA | |
| IL_3R1C_035 | 1/I/2:4, 1/J/5:7 | Isolated cWH basepair | geometric IL_3R1C_011 IL_10167.5 | |
| IL_3R1C_036 | 1/I/5:7, 1/J/2:4 | Isolated cWH basepair | geometric IL_3SJ2_002 IL_10167.5 | |
| IL_3R1C_011 | 1/K/2:4, 1/L/5:7 | Isolated cWH basepair IL_10167.5 | ||
| IL_3R1C_012 | 1/K/5:7, 1/L/2:4 | Isolated cWH basepair IL_10167.5 | ||
| IL_3R1C_013 | 1/M/2:4, 1/N/5:7 | Isolated cWH basepair | geometric IL_3R1C_017 IL_10167.5 | |
| IL_3R1C_014 | 1/M/5:7, 1/N/2:4 | Isolated cWH basepair | geometric IL_3R1C_018 IL_10167.5 | |
| IL_3R1C_015 | 1/O/2:4, 1/P/5:7 | Isolated cWH basepair | geometric IL_3R1C_031 NA | |
| IL_3R1C_016 | 1/O/5:7, 1/P/2:4 | Isolated cWH basepair | geometric IL_3R1C_031 NA | |
| IL_3R1C_017 | 1/Q/2:4, 1/R/5:7 | Isolated cWH basepair IL_10167.5 | ||
| IL_3R1C_018 | 1/Q/5:7, 1/R/2:4 | Isolated cWH basepair IL_10167.5 | ||
| IL_3R1C_019 | 1/S/2:4, 1/Y/5:7 | Isolated cWH basepair | geometric IL_3R1C_018 IL_10167.5 | |
| IL_3R1C_020 | 1/S/5:7, 1/Y/2:4 | Isolated cWH basepair | geometric IL_3R1C_012 IL_10167.5 | |
| IL_3R1C_021 | 1/T/2:4, 1/U/5:7 | Isolated cWH basepair | geometric IL_3R1C_031 NA | |
| IL_3R1C_022 | 1/T/5:7, 1/U/2:4 | Isolated cWH basepair | geometric IL_3R1C_031 NA | |
| IL_3R1C_025 | 1/V/2:4, 1/Z/5:7 | Isolated cWH basepair | geometric IL_3R1C_031 NA | |
| IL_3R1C_026 | 1/V/5:7, 1/Z/2:4 | Isolated cWH basepair | geometric IL_3R1C_017 IL_10167.5 | |
| IL_3R1C_023 | 1/W/2:4, 1/X/5:7 | Isolated cWH basepair | geometric IL_3R1C_017 IL_10167.5 | |
| IL_3R1C_024 | 1/W/5:7, 1/X/2:4 | Isolated cWH basepair | geometric IL_3SJ2_002 IL_10167.5 | |
| IL_3R1C_001 | 1/a/2:4, 1/b/5:7 | Isolated cWH basepair | geometric IL_3CZW_002 NA | |
| IL_3R1C_002 | 1/a/5:7, 1/b/2:4 | Isolated cWH basepair | geometric IL_3R1C_032 NA | |
| IL_3R1C_003 | 1/c/2:4, 1/d/5:7 | Isolated cWH basepair | geometric IL_3R1C_017 IL_10167.5 | |
| IL_3R1C_004 | 1/c/5:7, 1/d/2:4 | Isolated cWH basepair | geometric IL_3SJ2_002 IL_10167.5 | |
| IL_3R1C_005 | 1/e/2:4, 1/f/5:7 | Isolated cWH basepair | geometric IL_3SJ2_002 IL_10167.5 | |
| IL_3R1C_006 | 1/e/5:7, 1/f/2:4 | Isolated cWH basepair | geometric IL_3R1C_017 IL_10167.5 | |
| IL_3R1C_007 | 1/g/2:4, 1/h/5:7 | Isolated cWH basepair | geometric IL_3R1C_031 NA | |
| IL_3R1C_008 | 1/g/5:7, 1/h/2:4 | Isolated cWH basepair | geometric IL_3R1C_032 NA | |
| IL_3R1C_009 | 1/i/2:4, 1/j/5:7 | Isolated cWH basepair | geometric IL_3SJ2_001 IL_10167.5 | |
| IL_3R1C_010 | 1/i/5:7, 1/j/2:4 | Isolated cWH basepair | geometric IL_3SJ2_002 IL_10167.5 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_3R1C_037 | No text annotation |
Valid loops
No loops found
Problematic loops
No problematic loops
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