3WFQ Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_3WFQ_001 | 1/A/31:39 | tRNA anticodon loop | homologous HL_6ORD_036 NA | |
| HL_3WFQ_002 | 1/A/53:61 | T-loop with 2 stacked bulged bases | homologous HL_5AXM_003 HL_33597.4 | |
| HL_3WFQ_004 | 1/B/53:61 | T-loop with 2 stacked bulged bases | homologous HL_5AXM_003 HL_33597.4 | |
| HL_3WFQ_007 | 1/C/53:61 | T-loop with 2 stacked bulged bases | homologous HL_3WFS_003 HL_33597.4 | |
| HL_3WFQ_010 | 1/D/53:61 | T-loop with 2 stacked bulged bases | homologous HL_3WFS_003 HL_33597.4 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_3WFQ_003 | tRNA anticodon loop | ||
| HL_3WFQ_005 | No text annotation | ||
| HL_3WFQ_006 | tRNA anticodon loop | ||
| HL_3WFQ_008 | No text annotation | ||
| HL_3WFQ_009 | tRNA anticodon loop |
Valid loops
No loops found
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_3WFQ_001 | Tandem non-canonical cWW pairs | ||
| IL_3WFQ_002 | Tandem non-canonical cWW pairs |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_3WFQ_001 | 1/A/7:27, 1/A/43:49, 1/A/65:66 | No text annotation | ||
| J3_3WFQ_002 | 1/B/7:27, 1/B/43:49, 1/B/65:66 | No text annotation | ||
| J3_3WFQ_005 | 1/C/7:27, 1/C/43:49, 1/C/65:66 | No text annotation | ||
| J3_3WFQ_006 | 1/D/7:27, 1/D/43:49, 1/D/65:66 | No text annotation |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| J3_3WFQ_003 | No text annotation | ||
| J3_3WFQ_004 | No text annotation |
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